RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	UAP1L1	Q3KQV9	507 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	PQLC1	Q8N2U9	271 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	D2HGDH	Q8N465	521 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	REPS2	Q8NFH8	660 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	FBXO18	Q8NFZ0	1043 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	HSPBAP1	Q96EW2	488 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF512	Q96ME7	567 aa	Predicted RBP	6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	WWC2-AS2	Q96NR7	200 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	RHOBTB2	Q9BYZ6	727 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	KLHL42	Q9P2K6	505 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	G3BP2	Q9UN86	482 aa	Known RBP	6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	LIMCH1	Q9UPQ0	1083 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	GIT1	Q9Y2X7	761 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	IPP	Q9Y573	584 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZMYM3	Q14202	1370 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	PF4V1	P10720	104 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	EDNRB	P24530	442 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	APBA1	Q02410	837 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	MRPL49	Q13405	166 aa	Known RBP	6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	C3orf36	Q3SXR2	165 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	LCE4A	Q5TA78	99 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	MIER2	Q8N344	545 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	TTC9B	Q8N6N2	239 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	MPHOSPH9	Q99550	1183 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	C7orf25	Q9BPX7	421 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	PDCD2L	Q9BRP1	358 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	CDH19	Q9H159	772 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	CSRNP2	Q9H175	543 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	EPC1	Q9H2F5	836 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZIM2	Q9NZV7	527 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF180	Q9UJW8	692 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	JAG2	Q9Y219	1238 aa		6.93	□□□□□ -1.3
LEMD3-205	ENST00000544506	CCDC154	A6NI56	674 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	BTBD11	A6QL63	1104 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	HOXA3	O43365	443 aa	Predicted RBP	6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZSCAN20	P17040	1043 aa	Predicted RBP	6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	PTPN7	P35236	360 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	ELAVL1	Q15717	326 aa	Known RBP	6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	MFSD5	Q6N075	450 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF585A	Q6P3V2	769 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506		Q6ZSN1	163 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	PDZD4	Q76G19	769 aa	Predicted RBP	6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	MIGA2	Q7L4E1	593 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF808	Q8N4W9	903 aa	Predicted RBP	6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	CHST13	Q8NET6	341 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	HDAC10	Q969S8	669 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	CEP95	Q96GE4	821 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	BORCS6	Q96GS4	357 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	C8orf49	Q96NF6	230 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	KRTAP9-9	Q9BYP9	154 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	KRTAP9-4	Q9BYQ2	154 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	LDAH	Q9H6V9	325 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	LANCL2	Q9NS86	450 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	SMPD4	Q9NXE4	827 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	ANKRD6	Q9Y2G4	727 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	EID1	Q9Y6B2	187 aa		6.92	□□□□□ -1.3
LEMD3-205	ENST00000544506	WNT10B	O00744	389 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	CT47B1	P0C2W7	299 aa	Predicted RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	ACO1	P21399	889 aa	Known RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	GUCY1A2	P33402	732 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	SELENOP	P49908	381 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	MAMDC4	Q6UXC1	1216 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	RHOT1	Q8IXI2	618 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	JPH3	Q8WXH2	748 aa	Predicted RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	DEF6	Q9H4E7	631 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	TCAF1	Q9Y4C2	921 aa		6.91	□□□□□ -1.3
LEMD3-205	ENST00000544506	CAPN14	A8MX76	684 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	HHEX	Q03014	270 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	EFEMP1	Q12805	493 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	IL10RA	Q13651	578 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	NFE2	Q16621	373 aa	Predicted RBP	6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	HS1BP3	Q53T59	392 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	MFSD14B	Q5SR56	506 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	CCHCR1	Q8TD31	782 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	KAT5	Q92993	513 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	RAB24	Q969Q5	203 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	FAM89A	Q96GI7	184 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	CAMKK2	Q96RR4	588 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	ADO	Q96SZ5	270 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	NUP88	Q99567	741 aa	Predicted RBP	6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	LSM14B	Q9BX40	385 aa	Known RBP	6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	MANSC1	Q9H8J5	431 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	PCDHA13	Q9Y5I0	950 aa		6.9	□□□□□ -1.3
LEMD3-205	ENST00000544506	SCGB1D2	O95969	90 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	AMY1A	P04745	511 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	ALOX15	P16050	662 aa	Predicted RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	GNAT2	P19087	354 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	VCAM1	P19320	739 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	MAGEA10	P43363	369 aa	Predicted RBP	6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	FLT3LG	P49771	235 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	SP140	Q13342	867 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	PPP2R5A	Q15172	486 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	LRRC41	Q15345	812 aa		6.89	□□□□□ -1.31
LEMD3-205	ENST00000544506	RRP12	Q5JTH9	1297 aa	Known RBP	6.89	□□□□□ -1.31

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