RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 STAP2Q9UGK3 403 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 GJD2Q9UKL4 321 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 OGDHLQ9ULD0 1010 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PCDHB4Q9Y5E5 795 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 MYPNQ86TC9 1320 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PPL8 197 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQ27 194 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQ64 194 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQC6 194 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQD8 194 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PRAMEF22A3QJZ6 481 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PRSS47A8MTI9 375 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 ACOT7O00154 380 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 DDX3XO00571 662 aaKnown RBP eCLIP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 FFAR2O15552 330 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SNX2O60749 519 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PCDH8O95206 1070 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 IL18RAPO95256 599 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PYGLP06737 847 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PARP1P09874 1014 aaKnown RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 DHRS4L1P0CG22 281 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 TACR1P25103 407 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SMARCA1P28370 1054 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 MCAMP43121 646 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 RGS3P49796 1198 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 NOGQ13253 232 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 DAG1Q14118 895 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 NR0B2Q15466 257 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 FKBP15Q5T1M5 1219 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PRAMEF18Q5VWM3 479 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 BTNL9Q6UXG8 535 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 CYP26C1Q6V0L0 522 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PRR23BQ6ZRT6 265 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 TTC7BQ86TV6 843 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 C1QL4Q86Z23 238 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 DCP2Q8IU60 420 aaKnown RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 DRC7Q8IY82 874 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 C1orf131Q8NDD1 294 aaKnown RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 IL31RAQ8NI17 732 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 TRAPPC12Q8WVT3 735 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 CLEC4DQ8WXI8 215 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 ANKS1AQ92625 1134 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 RPGRQ92834 1020 aaKnown RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SYTL4Q96C24 671 aaPredicted RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC35A4Q96G79 324 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 HHIPL1Q96JK4 782 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 COLEC11Q9BWP8 271 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 PDGFDQ9GZP0 370 aaPredicted RBP4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 GREM2Q9H772 168 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 ATP13A1Q9HD20 1204 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 IMPACTQ9P2X3 320 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 USP18Q9UMW8 372 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 RABGAP1Q9Y3P9 1069 aa4.66□□□□□ -1.66
SFSWAP-211ENST00000542813 MROH2BQ7Z745 1585 aa4.65□□□□□ -1.66
SFSWAP-211ENST00000542813 RRN3P2A6NIE6 340 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 H3BUI4 141 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 TCERG1O14776 1098 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 APOL1O14791 398 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 HARSP12081 509 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 BRAFP15056 766 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GSPT1P15170 499 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 AOAHP28039 575 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 PDIA3P30101 505 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GDNFP39905 211 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 HSPA7P48741 367 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 HK3P52790 923 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 EIF5P55010 431 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 NKX6-1P78426 367 aaPredicted RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GRIN1Q05586 938 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 MGAT2Q10469 447 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 PRKG1Q13976 671 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CNGA2Q16280 664 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 MPEG1Q2M385 716 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 INTS11Q5TA45 600 aaKnown RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CIAPIN1Q6FI81 312 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GGT6Q6P531 493 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CABP7Q86V35 215 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 SIAH1Q8IUQ4 282 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 LRRC56Q8IYG6 542 aaPredicted RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 RNF152Q8N8N0 203 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CDYL2Q8N8U2 506 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GLB1L3Q8NCI6 653 aaPredicted RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 OR2I1PQ8NGU4 316 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 SEC14L1Q92503 715 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CCDC120Q96HB5 630 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 UBXN10Q96LJ8 280 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 RMDN3Q96TC7 470 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 C7orf25Q9BPX7 421 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 G6PC3Q9BUM1 346 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 TMEM120AQ9BXJ8 343 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 MTG2Q9H4K7 406 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 LMBRD1Q9NUN5 540 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 C19orf73Q9NVV2 129 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 BTBD7Q9P203 1132 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 GRHPRQ9UBQ7 328 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 EVLQ9UI08 416 aaPredicted RBP4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 DENND2AQ9ULE3 1009 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms