RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 MRGPREQ86SM8 312 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 LDLRAD3Q86YD5 345 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 ULK2Q8IYT8 1036 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 LENG9Q96B70 501 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 PGBD4Q96DM1 585 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 CPPED1Q9BRF8 314 aaPredicted RBP5□□□□□ -1.61
LEMD3-204ENST00000542032 TRIM8Q9BZR9 551 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 GPRC5DQ9NZD1 345 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 DPP7Q9UHL4 492 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 ZMYM3Q14202 1370 aa5□□□□□ -1.61
LEMD3-204ENST00000542032 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 PRAMEF4O60810 478 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 ITGA10O75578 1167 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 PRKD3O94806 890 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 ADH4P08319 380 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 KRT4P19013 534 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 ZFP36P26651 326 aaKnown RBP4.99□□□□□ -1.61
LEMD3-204ENST00000542032 CRHR1P34998 444 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 PTTG1IPP53801 180 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 TGFB2P61812 414 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 APBA1Q02410 837 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 MUM1Q2TAK8 710 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 ANO4Q32M45 955 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
LEMD3-204ENST00000542032 AUTS2Q8WXX7 1259 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 FAM126AQ9BYI3 521 aaPredicted RBP4.99□□□□□ -1.61
LEMD3-204ENST00000542032 EDARQ9UNE0 448 aa4.99□□□□□ -1.61
LEMD3-204ENST00000542032 GOLGA8AA7E2F4 631 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 AHRRA9YTQ3 701 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 FAM20BO75063 409 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 PHF2O75151 1096 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 CLSTN1O94985 981 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 CPEP16870 476 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 PTGS2P35354 604 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 GPR3P46089 330 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 ERVK-21P61565 698 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 ADRM1Q16186 407 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 IQSEC1Q6DN90 963 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 XYLT1Q86Y38 959 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 ZNF276Q8N554 614 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 ZNF480Q8WV37 535 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
LEMD3-204ENST00000542032 HOXB13Q92826 284 aaPredicted RBP4.98□□□□□ -1.61
LEMD3-204ENST00000542032 HAS1Q92839 578 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 CDC5LQ99459 802 aaKnown RBP4.98□□□□□ -1.61
LEMD3-204ENST00000542032 PRRX2Q99811 253 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 NDC1Q9BTX1 674 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 KCNH6Q9H252 994 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 FZD1Q9UP38 647 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 CLCA2Q9UQC9 943 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 CHST2Q9Y4C5 530 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 HS3ST4Q9Y661 456 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 PHLDB1Q86UU1 1377 aa4.98□□□□□ -1.61
LEMD3-204ENST00000542032 ATRNL1Q5VV63 1379 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 TBKBP1A7MCY6 615 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 B5MCH6 92 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 MTHFD2P13995 350 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 FLT3LGP49771 235 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 TMPRSS15P98073 1019 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 CDK17Q00537 523 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 PPP3CAQ08209 521 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 BMT2Q1RMZ1 405 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 MFSD14BQ5SR56 506 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 PRAMEF14Q5SWL7 426 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 GJC2Q5T442 439 aaPredicted RBP4.97□□□□□ -1.61
LEMD3-204ENST00000542032 METRNLQ641Q3 311 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 ANKS6Q68DC2 871 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 Q6ZVL8 140 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 SPATS2Q86XZ4 545 aaKnown RBP4.97□□□□□ -1.61
LEMD3-204ENST00000542032 SYT12Q8IV01 421 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 GPR156Q8NFN8 814 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 WDR66Q8TBY9 1149 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
LEMD3-204ENST00000542032 CHFRQ96EP1 664 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 CEP95Q96GE4 821 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 NRDE2Q9H7Z3 1164 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 IFT122Q9HBG6 1241 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 C14orf119Q9NWQ9 140 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 DKK2Q9UBU2 259 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 SORCS3Q9UPU3 1222 aa4.97□□□□□ -1.61
LEMD3-204ENST00000542032 WNT10BO00744 389 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 ADCY6O43306 1168 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 ITGB1P05556 798 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 APOBEC3AP31941 199 aaPredicted RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 MTNR1BP49286 362 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 INHBCP55103 352 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 NANOS3P60323 173 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 CT47A1Q5JQC4 288 aaPredicted RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 FAM47AQ5JRC9 791 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 RNF219Q5W0B1 726 aaPredicted RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 LRRC55Q6ZSA7 311 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 ZNF572Q7Z3I7 529 aaPredicted RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 TRMT2AQ8IZ69 625 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 RPUSD2Q8IZ73 545 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 MDM1Q8TC05 714 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 TGFBRAP1Q8WUH2 860 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 FATE1Q969F0 183 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms