RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PRKCBP05771 671 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 HOXD13P35453 343 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 GTF2BQ00403 316 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 GPM6BQ13491 265 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 FAM187BQ17R55 369 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 EPM2AIP1Q7L775 607 aaPredicted RBP18.35■□□□□ 0.53
UBC-208ENST00000540700 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 CDR2LQ86X02 465 aaPredicted RBP18.35■□□□□ 0.53
UBC-208ENST00000540700 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
UBC-208ENST00000540700 YME1L1Q96TA2 773 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 C2orf40Q9H1Z8 148 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 ST6GALNAC4Q9H4F1 302 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 SLC39A2Q9NP94 309 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 AGPAT5Q9NUQ2 364 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 CLDND1Q9NY35 253 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
UBC-208ENST00000540700 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 MYH11P35749 1972 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.34■□□□□ 0.53
UBC-208ENST00000540700 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 ARF4P18085 180 aaPredicted RBP18.34■□□□□ 0.53
UBC-208ENST00000540700 BMP6P22004 513 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 HTRA4P83105 476 aaPredicted RBP18.34■□□□□ 0.53
UBC-208ENST00000540700 NFKBIBQ15653 356 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 HFE2Q6ZVN8 426 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
UBC-208ENST00000540700 MRPL44Q9H9J2 332 aaKnown RBP18.34■□□□□ 0.53
UBC-208ENST00000540700 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
UBC-208ENST00000540700 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.53
UBC-208ENST00000540700 TISP43B9A030 160 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 H3BNC9 293 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 ACKR2O00590 384 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 ABLIM1O14639 778 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 GPR182O15218 404 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.52
UBC-208ENST00000540700 GCNT3O95395 438 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 MBD3O95983 291 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
UBC-208ENST00000540700 SMTNP53814 917 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 KCNB1Q14721 858 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 CLUL1Q15846 466 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 UBXN11Q5T124 520 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 EEF1DP3Q658K8 133 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 SMYD4Q8IYR2 804 aaPredicted RBP18.33■□□□□ 0.52
UBC-208ENST00000540700 SCFD1Q8WVM8 642 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 SEPT8Q92599 483 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 TARS2Q9BW92 718 aaKnown RBP18.33■□□□□ 0.52
UBC-208ENST00000540700 HAPLN2Q9GZV7 340 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 NSUN3Q9H649 340 aaKnown RBP18.33■□□□□ 0.52
UBC-208ENST00000540700 EXOC1Q9NV70 894 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 PRMT7Q9NVM4 692 aaPredicted RBP18.33■□□□□ 0.52
UBC-208ENST00000540700 TBX20Q9UMR3 447 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 C5orf42Q9H799 3197 aa18.33■□□□□ 0.52
UBC-208ENST00000540700 CNTNAP2Q9UHC6 1331 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 K7ERI5 159 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 EFNA5P52803 228 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 MAPK6Q16659 721 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 ISM2Q6H9L7 571 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 MAP4K3Q8IVH8 894 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 ADHFE1Q8IWW8 467 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 TMEM192Q8IY95 271 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 ZBTB45Q96K62 511 aaPredicted RBP18.32■□□□□ 0.52
UBC-208ENST00000540700 SAMD11Q96NU1 681 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 EIF2AQ9BY44 585 aaKnown RBP18.32■□□□□ 0.52
UBC-208ENST00000540700 NUP62CLQ9H1M0 184 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 PDZD7Q9H5P4 517 aa18.32■□□□□ 0.52
UBC-208ENST00000540700 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
UBC-208ENST00000540700 ENPP3O14638 875 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 CSPG5O95196 566 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 IRS1P35568 1242 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
UBC-208ENST00000540700 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
UBC-208ENST00000540700 APBB2Q92870 758 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 SMARCE1Q969G3 411 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
UBC-208ENST00000540700 ADAM2Q99965 735 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 KCNH6Q9H252 994 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 PTPRHQ9HD43 1115 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 KIAA1468Q9P260 1216 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 PRKAG3Q9UGI9 489 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 MUTYHQ9UIF7 546 aa18.31■□□□□ 0.52
UBC-208ENST00000540700 C19orf67A6NJJ6 358 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 ANKRD63C9JTQ0 380 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 BIN1O00499 593 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 ERLIN2O94905 339 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 PROZP22891 400 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 RBM43Q6ZSC3 357 aaKnown RBP18.3■□□□□ 0.52
UBC-208ENST00000540700 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 SNX27Q96L92 541 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 MFSD14AQ96MC6 490 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 GSDMAQ96QA5 445 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 PHOX2BQ99453 314 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms