RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 EDRF1Q3B7T1 1238 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TSHZ1Q6ZSZ6 1077 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 HS2ST1Q7LGA3 356 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TARS2Q9BW92 718 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 HIPK3Q9H422 1215 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 CNTNAP2Q9UHC6 1331 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 TSPAN1O60635 241 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 CSDE1O75534 798 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 AXLP30530 894 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 PMS1P54277 932 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 LPIN1Q14693 890 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ANKRD40Q6AI12 368 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 CATSPER4Q7RTX7 472 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 TSG101Q99816 390 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 IKZF4Q9H2S9 585 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 PTPRHQ9HD43 1115 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ERVK-5Q9HDB9 667 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 TNFSF13BQ9Y275 285 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 A0A1B0GUA9 196 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 GOLGA6L9A6NEM1 432 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 IKBKBO14920 756 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 GPR182O15218 404 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 RPS6KA5O75582 802 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 TOM1L1O75674 476 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ERLIN2O94905 339 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ZRANB2O95218 330 aaKnown RBP eCLIP13.41□□□□□ -0.268e-6■■■□□ 17.5
SCARB1-204ENST00000535005 PNMA6AP0CW24 399 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 GARTP22102 1010 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 PROZP22891 400 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 LIG4P49917 911 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ETF1P62495 437 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 GPS2Q13227 327 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 SLC39A4Q6P5W5 647 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 TMCO3Q6UWJ1 677 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 AGO3Q9H9G7 860 aaKnown RBP13.41□□□□□ -0.26
SCARB1-204ENST00000535005 AGPAT5Q9NUQ2 364 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
SCARB1-204ENST00000535005 CCDC85CA6NKD9 419 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 EFCAB8A8MWE9 144 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ABLIM1O14639 778 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 HNRNPDLO14979 420 aaKnown RBP13.4□□□□□ -0.26
SCARB1-204ENST00000535005 KIAA0391O15091 583 aaKnown RBP13.4□□□□□ -0.26
SCARB1-204ENST00000535005 B4GALT5O43286 388 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 CBFA2T2O43439 604 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ARF4P18085 180 aaPredicted RBP13.4□□□□□ -0.26
SCARB1-204ENST00000535005 FGFR4P22455 802 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ADSSP30520 456 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
SCARB1-204ENST00000535005 STX17P56962 302 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 GPNMBQ14956 572 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ATF7IP2Q5U623 682 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 BICD1Q96G01 975 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 HTATIP2Q9BUP3 242 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 OSBPL7Q9BZF2 842 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.4□□□□□ -0.26
SCARB1-204ENST00000535005 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
SCARB1-204ENST00000535005 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 TIMP1P01033 207 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 GHRP10912 638 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
SCARB1-204ENST00000535005 CLCN6P51797 869 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 FKBP3Q00688 224 aaKnown RBP13.39□□□□□ -0.27
SCARB1-204ENST00000535005 MYL5Q02045 173 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 NCAPHQ15003 741 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 UBXN4Q92575 508 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 PADI3Q9ULW8 664 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 USP20Q9Y2K6 914 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 A0A0B4J269 797 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 TISP43B9A030 160 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 N4BP3O15049 544 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 NBNO60934 754 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms