RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
CTSB-228ENST00000533455 HOMER3Q9NSC5 361 aa17.85■□□□□ 0.45
CTSB-228ENST00000533455 WHRNQ9P202 907 aa17.85■□□□□ 0.45
CTSB-228ENST00000533455 EP400Q96L91 3159 aa17.85■□□□□ 0.45
CTSB-228ENST00000533455 FAM170AA1A519 330 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 K7ENM7 598 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 SLCO1A2P46721 670 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 MCCD1P59942 119 aaPredicted RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 ZNF746Q6NUN9 644 aaPredicted RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 CRELD2Q6UXH1 353 aaPredicted RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 EXOC3L1Q86VI1 746 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 FAM71AQ8IYT1 594 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 RDH13Q8NBN7 331 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 UHMK1Q8TAS1 419 aaKnown RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 ZNF564Q8TBZ8 553 aaPredicted RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 SERPINB12Q96P63 405 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 EHMT1Q9H9B1 1298 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 SGPL1O95470 568 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 ECEL1O95672 775 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 CALCOCO2Q13137 446 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 CEP55Q53EZ4 464 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 MIGA2Q7L4E1 593 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 NOP9Q86U38 636 aaKnown RBP17.84■□□□□ 0.45
CTSB-228ENST00000533455 LXNQ9BS40 222 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 TEKT3Q9BXF9 490 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 UVRAGQ9P2Y5 699 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 GTF3C4Q9UKN8 822 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 PCDHAC2Q9Y5I4 1007 aa17.84■□□□□ 0.45
CTSB-228ENST00000533455 POLR2MP0CAP2 368 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 RWDD2BP57060 319 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 FKBP1AP62942 108 aaKnown RBP17.83■□□□□ 0.45
CTSB-228ENST00000533455 TLDC1Q6P9B6 456 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 RHBDF2Q6PJF5 856 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 RNF207Q6ZRF8 634 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 PSPC1Q8WXF1 523 aaKnown RBP17.83■□□□□ 0.45
CTSB-228ENST00000533455 NUP85Q9BW27 656 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 CDC42EP4Q9H3Q1 356 aaKnown RBP17.83■□□□□ 0.45
CTSB-228ENST00000533455 AAASQ9NRG9 546 aa17.83■□□□□ 0.45
CTSB-228ENST00000533455 DBR1Q9UK59 544 aaKnown RBP17.83■□□□□ 0.45
CTSB-228ENST00000533455 FSCN2O14926 492 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 SPOPO43791 374 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 CFBP00751 764 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 VIL1P09327 827 aaKnown RBP17.82■□□□□ 0.44
CTSB-228ENST00000533455 ATP5DP30049 168 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 GCLMP48507 274 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 IFNAR2P48551 515 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 JAG1P78504 1218 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 ACCSQ96QU6 501 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 ZNF577Q9BSK1 485 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 ABCF3Q9NUQ8 709 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 USP15Q9Y4E8 981 aaPredicted RBP17.82■□□□□ 0.44
CTSB-228ENST00000533455 ATRNL1Q5VV63 1379 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
CTSB-228ENST00000533455 ZNF536O15090 1300 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 TP73O15350 636 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 ATMINO43313 823 aaPredicted RBP17.82■□□□□ 0.44
CTSB-228ENST00000533455 STAT2P52630 851 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 FMO1Q01740 532 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 RASA3Q14644 834 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 RRP1BQ14684 758 aaKnown RBP17.82■□□□□ 0.44
CTSB-228ENST00000533455 GALNTL6Q49A17 601 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 PADI6Q6TGC4 694 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 CCHCR1Q8TD31 782 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 SHC3Q92529 594 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 KAT5Q92993 513 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 PTPN22Q9Y2R2 807 aa17.82■□□□□ 0.44
CTSB-228ENST00000533455 GH2P01242 217 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 ARP10275 920 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 KCNJ1P48048 391 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 MXI1P50539 228 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 SNRPFP62306 86 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 E2F5Q15329 346 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 CCDC38Q502W7 563 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 SYDE1Q6ZW31 735 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 CPNE8Q86YQ8 564 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 PLEKHO2Q8TD55 490 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 N4BP2L2Q92802 583 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 KREMEN1Q96MU8 473 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 TMEM117Q9H0C3 514 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 CCDC113Q9H0I3 377 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 LARSQ9P2J5 1176 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 AGAP1Q9UPQ3 857 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 G3V3G9 751 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 UBOX5O94941 541 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 ITIH2P19823 946 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 NCALDP61601 193 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 ZNF268Q14587 947 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 FAM133BQ5BKY9 247 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms