RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 POU5F1BQ06416 359 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 EMC2Q15006 297 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ZRSR1Q15695 479 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 KIZQ2M2Z5 673 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SPECC1Q5M775 1068 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 C1QTNF12Q5T7M4 302 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 KCNK18Q7Z418 384 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RTN4RL1Q86UN2 441 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ZNF410Q86VK4 478 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RHPN2Q8IUC4 686 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 KSR1Q8IVT5 923 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SYT2Q8N9I0 419 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ACRBPQ8NEB7 543 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PHOSPHO2Q8TCD6 241 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 TMEM40Q8WWA1 233 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PSPC1Q8WXF1 523 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SEPT8Q92599 483 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 APBB2Q92870 758 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CALML4Q96GE6 196 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RNPC3Q96LT9 517 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CCDC43Q96MW1 224 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 OSMRQ99650 979 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 FDXACB1Q9BRP7 624 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ADAM33Q9BZ11 813 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 BHMT2Q9H2M3 363 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 FBXO9Q9UK97 447 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PADI3Q9ULW8 664 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 GINS2Q9Y248 185 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 NOC2LQ9Y3T9 749 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ATP6V1DQ9Y5K8 247 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SLC4A7Q9Y6M7 1214 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 LAMA2P24043 3122 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ARHGEF35A5YM69 484 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CUTAO60888 179 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RPS6KA5O75582 802 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SRGAP2CP0DJJ0 459 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 DARSP14868 501 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CD52P31358 61 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SLC12A3P55017 1021 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PLCB3Q01970 1234 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 EHHADHQ08426 723 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 LAMTOR4Q0VGL1 99 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 DSC3Q14574 896 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 MXD4Q14582 209 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 KARSQ15046 597 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 TMEM119Q4V9L6 283 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ODR4Q5SWX8 454 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RINT1Q6NUQ1 792 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 C1orf186Q6ZWK4 172 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 MAEAQ7L5Y9 396 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 MCPH1Q8NEM0 835 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 KCNG4Q8TDN1 519 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 LRRC15Q8TF66 581 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CDK5RAP3Q96JB5 506 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ZNF668Q96K58 619 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PPP1R16BQ96T49 567 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PLIN2Q99541 437 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 FTHL17Q9BXU8 183 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 GCOM2Q9BZD3 368 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 IFT122Q9HBG6 1241 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ERVK-5Q9HDB9 667 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 RRAGDQ9NQL2 400 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 PCDHA7Q9UN72 937 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 ST3GAL5Q9UNP4 418 aa6.92□□□□□ -1.3
ATPAF1-209ENST00000529214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 SFI1A8K8P3 1242 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 C3orf80F5H4A9 247 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PES1O00541 588 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CEP290O15078 2479 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CSDE1O75534 798 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PLA2G4BP0C869 781 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 NPR3P17342 541 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PLCG1P19174 1290 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 GLRA2P23416 452 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CD151P48509 253 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 NAP1L1P55209 391 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 TBX4P57082 545 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PTENP60484 403 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 WDR5P61964 334 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 KRT85P78386 507 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 PAK2Q13177 524 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 SCN5AQ14524 2016 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 ZNF394Q53GI3 561 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 ZC3H12AQ5D1E8 599 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 CT47A1Q5JQC4 288 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 FAM102BQ5T8I3 360 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 SRGAP1Q7Z6B7 1085 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 FAM228AQ86W67 206 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 RNF149Q8NC42 400 aa6.91□□□□□ -1.3
ATPAF1-209ENST00000529214 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms