RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ZNF445P59923 1031 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 NFIL3Q16649 462 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 FOXR2Q6PJQ5 311 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 C1orf112Q9NSG2 853 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 FAM105AQ9NUU6 356 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 DMAC2Q9NW81 257 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ABHD14A-ACY1A0A1B0GW23 586 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 H0YGN5 161 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ENPP3O14638 875 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 OGTO15294 1046 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ACTN1P12814 892 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 NR2F2P24468 414 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 RAB27AP51159 221 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 IKBKEQ14164 716 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 MYBPC2Q14324 1141 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ZBTB41Q5SVQ8 909 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 LRSAM1Q6UWE0 723 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 SLC9A9Q8IVB4 645 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ZC3H3Q8IXZ2 948 aaKnown RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 CEP120Q8N960 986 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 SMG8Q8ND04 991 aaKnown RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 TMEM174Q8WUU8 243 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■■□□ 18.7
CAPN1-217ENST00000529133 TRIM6Q9C030 488 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 NXF3Q9H4D5 531 aaKnown RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 AGO2Q9UKV8 859 aaKnown RBP12.5□□□□□ -0.41
CAPN1-217ENST00000529133 IPPQ9Y573 584 aa12.5□□□□□ -0.41
CAPN1-217ENST00000529133 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 GOLGA8JA6NMD2 632 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 EFCAB14O75071 495 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 ZNF623O75123 536 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 BAIAP3O94812 1187 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 FGBP02675 491 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 GRM5P41594 1212 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 WDR5P61964 334 aaKnown RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 FAM189BP81408 668 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 OTOP2Q7RTS6 562 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 THNSL1Q8IYQ7 743 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
CAPN1-217ENST00000529133 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 HES2Q9Y543 173 aa12.49□□□□□ -0.41
CAPN1-217ENST00000529133 MEFVO15553 781 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 EXTL3O43909 919 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 EXOC3O60645 756 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 ADRB2P07550 413 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 SKIP12755 728 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 TNFSF9P41273 254 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CASP4P49662 377 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 ACOT2P49753 483 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 OSTNP61366 133 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 FKBP3Q00688 224 aaKnown RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 ADAM9Q13443 819 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 KYAT1Q16773 422 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CRELD2Q6UXH1 353 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CBWD2Q8IUF1 395 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 TMEM192Q8IY95 271 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 HERVK_113Q902F9 699 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 LPPQ93052 612 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 BPIFA3Q9BQP9 254 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CCDC94Q9BW85 323 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms