RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CDT1Q9H211 546 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 KCTD10Q9H3F6 313 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 MRPL44Q9H9J2 332 aaKnown RBP7.13□□□□□ -1.27
CD44-214ENST00000525211 PTPRHQ9HD43 1115 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 IL23AQ9NPF7 189 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 OLFML3Q9NRN5 406 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 EXOC1Q9NV70 894 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 KCND2Q9NZV8 630 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 VPS9D1Q9Y2B5 631 aa7.13□□□□□ -1.27
CD44-214ENST00000525211 LAMA2P24043 3122 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 LAMA3Q16787 3333 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 GOLGA8IPA6NC78 632 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 GOLGA8JA6NMD2 632 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 C9IYK1 514 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 K7ERI5 159 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 ACKR2O00590 384 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 FAM189A1O60320 539 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 CAND2O75155 1236 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 NPTXRO95502 500 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 PROZP22891 400 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 TNFSF9P41273 254 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 CASP4P49662 377 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 STX17P56962 302 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 AMPD3Q01432 767 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 TFDP1Q14186 410 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 KCNB1Q14721 858 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 FAM187BQ17R55 369 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 SWT1Q5T5J6 900 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 CCDC183Q5T5S1 534 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 CRELD2Q6UXH1 353 aaPredicted RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 RSPH3Q86UC2 560 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 MAP4K3Q8IVH8 894 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 ADSSL1Q8N142 457 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 CRIPAKQ8N1N5 446 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 RDH13Q8NBN7 331 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 PLEKHO2Q8TD55 490 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 KCNN1Q92952 543 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 HS3ST6Q96QI5 342 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 PYM1Q9BRP8 204 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 NFKBIZQ9BYH8 718 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 IFIH1Q9BYX4 1025 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 ZMYND15Q9H091 742 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 PRO3102Q9H379 93 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 NXF3Q9H4D5 531 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 ST6GALNAC4Q9H4F1 302 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 AGPAT5Q9NUQ2 364 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 MIOSQ9NXC5 875 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 LARSQ9P2J5 1176 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 CACNG4Q9UBN1 327 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 LIMD1Q9UGP4 676 aa7.12□□□□□ -1.27
CD44-214ENST00000525211 PIN4Q9Y237 131 aaKnown RBP7.12□□□□□ -1.27
CD44-214ENST00000525211 PHLPP2Q6ZVD8 1323 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 CNTNAP2Q9UHC6 1331 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 A0A1B0GUA9 196 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 SYCE3A1L190 88 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 M0QZ92 97 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 MBD3O95983 291 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 PIGRP01833 764 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ADRB2P07550 413 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 FGFR1P11362 822 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 HARSP12081 509 aaKnown RBP7.11□□□□□ -1.27
CD44-214ENST00000525211 MYOGP15173 224 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 AKAP5P24588 427 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 OSTNP61366 133 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 WDR5P61964 334 aaKnown RBP7.11□□□□□ -1.27
CD44-214ENST00000525211 FAM189BP81408 668 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 FPGSQ05932 587 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 PAK2Q13177 524 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 PRPF4BQ13523 1007 aaKnown RBP7.11□□□□□ -1.27
CD44-214ENST00000525211 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 MAPK6Q16659 721 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 BMT2Q1RMZ1 405 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ZSCAN23Q3MJ62 389 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ZCWPW2Q504Y3 356 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ZNF658Q5TYW1 1059 aaPredicted RBP7.11□□□□□ -1.27
CD44-214ENST00000525211 ATF7IP2Q5U623 682 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 RASIP1Q5U651 963 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ANKRD40Q6AI12 368 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 KLHL10Q6JEL2 608 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 FAM117BQ6P1L5 589 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 AGMOQ6ZNB7 445 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 ZNF598Q86UK7 904 aaKnown RBP7.11□□□□□ -1.27
CD44-214ENST00000525211 ECHDC2Q86YB7 292 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 EXOC8Q8IYI6 725 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 TMEM199Q8N511 208 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 SAAL1Q96ER3 474 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 GSDMAQ96QA5 445 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 APOL6Q9BWW8 343 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 C17orf75Q9HAS0 396 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 KLK14Q9P0G3 267 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 SEL1LQ9UBV2 794 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 PLAGL2Q9UPG8 496 aa7.11□□□□□ -1.27
CD44-214ENST00000525211 STYXL1Q9Y6J8 313 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms