RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 ATRNL1Q5VV63 1379 aa18.08■□□□□ 0.48
TSPAN17-209ENST00000515708 IPO5O00410 1097 aaKnown RBP18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 AUHQ13825 339 aaKnown RBP18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 SIX1Q15475 284 aaPredicted RBP18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 CPNE8Q86YQ8 564 aa18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 TMEM174Q8WUU8 243 aa18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
TSPAN17-209ENST00000515708 PASKQ96RG2 1323 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 RARAP10276 462 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 CYFIP1Q7L576 1253 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 FAM71AQ8IYT1 594 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 ZNF564Q8TBZ8 553 aaPredicted RBP18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 RUNDC3BQ96NL0 473 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 EHMT1Q9H9B1 1298 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 ACP6Q9NPH0 428 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SAMD15Q9P1V8 674 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SYNPO2Q9UMS6 1093 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SCN9AQ15858 1988 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SPOPO43791 374 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 MGRN1O60291 552 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 KCNJ1P48048 391 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SF3A3Q12874 501 aaKnown RBP eCLIP18.06■□□□□ 0.489e-7■■■■□ 24.7
TSPAN17-209ENST00000515708 WLSQ5T9L3 541 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 C12orf56Q8IXR9 622 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 ZSWIM2Q8NEG5 633 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 PLEKHO2Q8TD55 490 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 BTBD6Q96KE9 485 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 NUP85Q9BW27 656 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 TDRD3Q9H7E2 651 aaKnown RBP18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 SLC12A4Q9UP95 1085 aa18.06■□□□□ 0.48
TSPAN17-209ENST00000515708 VIMP08670 466 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 IFNAR2P48551 515 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 FKBP1AP62942 108 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 C12orf50Q8NA57 414 aaPredicted RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 XXYLT1Q8NBI6 393 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 MAGEC3Q8TD91 643 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 ACCSQ96QU6 501 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 ELAC2Q9BQ52 826 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 TMEM117Q9H0C3 514 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 HSPBP1Q9NZL4 362 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 SERPINA10Q9UK55 444 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 DBR1Q9UK59 544 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CEP83Q9Y592 693 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 DDX39AO00148 427 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CYP26A1O43174 497 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CYP1A2P05177 515 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 GSTA1P08263 222 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 MXI1P50539 228 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 ALCAMQ13740 583 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CNGA2Q16280 664 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 TAOK1Q7L7X3 1001 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 SLC47A2Q86VL8 602 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CCDC25Q86WR0 208 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 ACER1Q8TDN7 264 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 KREMEN1Q96MU8 473 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 SCLT1Q96NL6 688 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CSRNP1Q96S65 589 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 TACO1Q9BSH4 297 aaKnown RBP18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 CCDC113Q9H0I3 377 aa18.05■□□□□ 0.48
TSPAN17-209ENST00000515708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.05■□□□□ 0.486e-9■■■■■ 134.6
TSPAN17-209ENST00000515708 ECEL1O95672 775 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 MAPTP10636 758 aaKnown RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 FMO1Q01740 532 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RASA3Q14644 834 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ZNF568Q3ZCX4 644 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 CCDC38Q502W7 563 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RPAINQ86UA6 219 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RIT2Q99578 217 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RANBP17Q9H2T7 1088 aaKnown RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ENTPD3O75355 529 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RWDD2BP57060 319 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ELF3P78545 371 aaPredicted RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 CALCOCO2Q13137 446 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 NEDD9Q14511 834 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 RNF207Q6ZRF8 634 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 EXOC3L1Q86VI1 746 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 PPM1KQ8N3J5 372 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ROPN1BQ9BZX4 212 aaPredicted RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 CXorf56Q9H5V9 222 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 LRRC19Q9H756 370 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ROPN1Q9HAT0 212 aaPredicted RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 GTF3C4Q9UKN8 822 aa18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
TSPAN17-209ENST00000515708 TP73O15350 636 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 PPP1R7Q15435 360 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 NBPF9Q3BBW0 867 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 HIBCHQ6NVY1 386 aaPredicted RBP18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 TRMT10CQ7L0Y3 403 aaKnown RBP18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 MIGA2Q7L4E1 593 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 TRPM8Q7Z2W7 1104 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 SHC3Q92529 594 aa18.03■□□□□ 0.48
TSPAN17-209ENST00000515708 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms