RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 PPM1EQ8WY54 764 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 CELF4Q9BZC1 486 aaKnown RBP9.95□□□□□ -0.82
CPNE4-210ENST00000512332 FAM129AQ9BZQ8 928 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 GTF3C4Q9UKN8 822 aa9.95□□□□□ -0.82
CPNE4-210ENST00000512332 VWA5AO00534 786 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 NDUFAB1O14561 156 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 SGPL1O95470 568 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 NUDT17P0C025 328 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CYP11B1P15538 503 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 DPEP1P16444 411 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 SCP2P22307 547 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PTGIRP43119 386 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ATP1A2P50993 1020 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 FMO1Q01740 532 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CDR2Q01850 454 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PTGISQ16647 500 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 BRDTQ58F21 947 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ARHGEF16Q5VV41 709 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 JAMLQ86YT9 394 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 FBXL13Q8NEE6 735 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ZSWIM2Q8NEG5 633 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 SEMA4DQ92854 862 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ATP6V0A1Q93050 837 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 GPRC5CQ9NQ84 441 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PDLIM7Q9NR12 457 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PARP2Q9UGN5 583 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 SLC12A6Q9UHW9 1150 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 TRPC6Q9Y210 931 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CTDP1Q9Y5B0 961 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PCDHA3Q9Y5H8 950 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ANKRD63C9JTQ0 380 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 H0YCG3 227 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CYP26A1O43174 497 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 STBD1O95210 358 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CPP00450 1065 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 MYCLP12524 364 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 COMTP21964 271 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 GARTP22102 1010 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 RPS12P25398 132 aaKnown RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CCND2P30279 289 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 GUCY1A3Q02108 690 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 GCNT1Q02742 428 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 MAP2K1Q02750 393 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 YTHDF3Q7Z739 585 aaKnown RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 CROCCP2Q86T23 111 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 NLRX1Q86UT6 975 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PPM1KQ8N3J5 372 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 PRELID2Q8N945 189 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 MCPH1Q8NEM0 835 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 UBLCP1Q8WVY7 318 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-210ENST00000512332 KAT5Q92993 513 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 NT5C1BQ96P26 610 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 ERVK-5Q9HDB9 667 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 KMT5AQ9NQR1 393 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 RAB20Q9NX57 234 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 FAM169AQ9Y6X4 670 aa9.94□□□□□ -0.82
CPNE4-210ENST00000512332 NFASCO94856 1347 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 DENND3A2RUS2 1198 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 TMEM150BA6NC51 233 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 CCDC169A6NNP5 214 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 STAM2O75886 525 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 DGAT1O75907 488 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 FAM107AO95990 144 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 NR3C2P08235 984 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 PAEPP09466 180 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 CLDN10P78369 228 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 CYP24A1Q07973 514 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF211Q13398 564 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 SEL1L2Q5TEA6 688 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 TTC19Q6DKK2 380 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 SLC47A2Q86VL8 602 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 C12orf50Q8NA57 414 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 DDX1Q92499 740 aaKnown RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 KRT35Q92764 455 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 CDHR1Q96JP9 859 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 TRIM51Q9BSJ1 452 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 PABPC3Q9H361 631 aaKnown RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 RPAP3Q9H6T3 665 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 TMOD4Q9NZQ9 345 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 CNOT7Q9UIV1 285 aaKnown RBP9.93□□□□□ -0.82
CPNE4-210ENST00000512332 ADAMTS5Q9UNA0 930 aa9.93□□□□□ -0.82
CPNE4-210ENST00000512332 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 GOLGA8IPA6NC78 632 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 GOLGA8JA6NMD2 632 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 USP8P40818 1118 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PDE6CP51160 858 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 NAA35Q5VZE5 725 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PLA2G4FQ68DD2 849 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 MICALCLQ6ZW33 695 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 SV2AQ7L0J3 742 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 PROCA1Q8NCQ7 364 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 ZNF564Q8TBZ8 553 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-210ENST00000512332 SLC16A10Q8TF71 515 aa9.92□□□□□ -0.82
CPNE4-210ENST00000512332 GLG1Q92896 1179 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms