RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	CDR2L	Q86X02	465 aa	Predicted RBP	13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	HACE1	Q8IYU2	909 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	SLC22A17	Q8WUG5	538 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	IFT74	Q96LB3	600 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	ZFP42	Q96MM3	310 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	PNMA5	Q96PV4	448 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	FAM193B	Q96PV7	902 aa	Predicted RBP	13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	GBP3	Q9H0R5	595 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	PDZD7	Q9H5P4	517 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	C17orf75	Q9HAS0	396 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	POLD4	Q9HCU8	107 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	HCFC2	Q9Y5Z7	792 aa		13.4	□□□□□ -0.26
CLDND1-223	ENST00000511081	TDRD15	B5MCY1	1934 aa	Known RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	LOC730098	B7Z3J9	87 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	N4BP3	O15049	544 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	GPR37L1	O60883	481 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	NPTXR	O95502	500 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	PRKCB	P05771	671 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	AKAP5	P24588	427 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	GUCY2C	P25092	1073 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	MLH1	P40692	756 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	SCNN1G	P51170	649 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	PRPF4B	Q13523	1007 aa	Known RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	NT5DC1	Q5TFE4	455 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	GPR65	Q8IYL9	337 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	SYT2	Q8N9I0	419 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	DEPTOR	Q8TB45	409 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	CASP10	Q92851	521 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	INTS4	Q96HW7	963 aa	Known RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	AK8	Q96MA6	479 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	POP1	Q99575	1024 aa	Known RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	TIPIN	Q9BVW5	301 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	TRIM6	Q9C030	488 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	NT5C3A	Q9H0P0	336 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	TMEM134	Q9H6X4	195 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	C11orf16	Q9NQ32	467 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	MARCH5	Q9NX47	278 aa		13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	RBM19	Q9Y4C8	960 aa	Known RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081	USP15	Q9Y4E8	981 aa	Predicted RBP	13.39	□□□□□ -0.27
CLDND1-223	ENST00000511081		K7ERI5	159 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	BMP15	O95972	392 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	SOD2	P04179	222 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	SRGAP2B	P0DMP2	458 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	PDC	P20941	246 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	NPTX2	P47972	431 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	SLC12A3	P55017	1021 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	PTPN14	Q15678	1187 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	NAB2	Q15742	525 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	TMEM119	Q4V9L6	283 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	KIAA0319	Q5VV43	1072 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	EEF1DP3	Q658K8	133 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	AUTS2	Q8WXX7	1259 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	KCNN1	Q92952	543 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	RUSC1	Q9BVN2	902 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	PHF7	Q9BWX1	381 aa	Predicted RBP	13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	PTPRH	Q9HD43	1115 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	CHST7	Q9NS84	486 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	ARHGAP28	Q9P2N2	729 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	USP20	Q9Y2K6	914 aa		13.38	□□□□□ -0.27
CLDND1-223	ENST00000511081	VWA3A	A6NCI4	1184 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	HIP1R	O75146	1068 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	C1R	P00736	705 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	ALAD	P13716	330 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	SSTR3	P32745	418 aa	Predicted RBP	13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	PEX3	P56589	373 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	GRIK3	Q13003	919 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	TAS1R3	Q7RTX0	852 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	TAS1R1	Q7RTX1	841 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	SPIRE2	Q8WWL2	714 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	DRC1	Q96MC2	740 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	ACO2	Q99798	780 aa	Known RBP	13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	LRFN3	Q9BTN0	628 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	COLEC11	Q9BWP8	271 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	APOL6	Q9BWW8	343 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	ADAM7	Q9H2U9	754 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	RXFP1	Q9HBX9	757 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	KCND2	Q9NZV8	630 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	KCNG1	Q9UIX4	513 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	TNFSF13B	Q9Y275	285 aa		13.37	□□□□□ -0.27
CLDND1-223	ENST00000511081	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	PTGES	O14684	152 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	CNP	P09543	421 aa	Known RBP	13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	SYT1	P21579	422 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	LONP1	P36776	959 aa	Known RBP	13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	OR1G1	P47890	313 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	ITIH3	Q06033	890 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	DCAF4L1	Q3SXM0	396 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	TPRN	Q4KMQ1	711 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	ARSH	Q5FYA8	562 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	XKR4	Q5GH76	650 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	ATF7IP2	Q5U623	682 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	CABP7	Q86V35	215 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	PPFIBP1	Q86W92	1011 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	RNF135	Q8IUD6	432 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	KLHL5	Q96PQ7	755 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	RPS6KC1	Q96S38	1066 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	ADPGK	Q9BRR6	497 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	KIFC3	Q9BVG8	833 aa		13.36	□□□□□ -0.27
CLDND1-223	ENST00000511081	HERC2P3	Q9BVR0	1158 aa		13.36	□□□□□ -0.27

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