RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 KIFC3Q9BVG8 833 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
HLA-B-254ENST00000497377 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 POLD4Q9HCU8 107 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
HLA-B-254ENST00000497377 FAM13BQ9NYF5 915 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 PCDHA7Q9UN72 937 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 IPPQ9Y573 584 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 TCHHQ07283 1943 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 NPHP3-ACAD11A0A0J9YXS1 232 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 RFXAPO00287 272 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 INPPL1O15357 1258 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 SLC16A4O15374 487 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 OFD1O75665 1012 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 PPM1AP35813 382 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 NCKAP1LP55160 1127 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 AMPD3Q01432 767 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
HLA-B-254ENST00000497377 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
HLA-B-254ENST00000497377 LPPQ93052 612 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 MRPL38Q96DV4 380 aaKnown RBP12.6□□□□□ -0.39
HLA-B-254ENST00000497377 EIF2AQ9BY44 585 aaKnown RBP12.6□□□□□ -0.39
HLA-B-254ENST00000497377 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 CWH43Q9H720 699 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 SEL1LQ9UBV2 794 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
HLA-B-254ENST00000497377 A0A087X0B3 334 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 TRAK2O60296 914 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 NPTXRO95502 500 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
HLA-B-254ENST00000497377 GAP43P17677 238 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 LIG1P18858 919 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
HLA-B-254ENST00000497377 UBE3AQ05086 875 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 RESP18Q5W5W9 173 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 ZPBP2Q6X784 338 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 LRRC55Q6ZSA7 311 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 PDILTQ8N807 584 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 COLGALT1Q8NBJ5 622 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 DDX12PQ92771 950 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
HLA-B-254ENST00000497377 PRRC2BQ5JSZ5 2229 aaKnown RBP12.58□□□□□ -0.39
HLA-B-254ENST00000497377 MYMKA6NI61 221 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 CMA1P23946 247 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 ALDH7A1P49419 539 aaKnown RBP12.58□□□□□ -0.4
HLA-B-254ENST00000497377 RNASELQ05823 741 aaKnown RBP12.58□□□□□ -0.4
HLA-B-254ENST00000497377 E2F4Q16254 413 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 KCNT2Q6UVM3 1135 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 HAUS6Q7Z4H7 955 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 FAM178BQ8IXR5 827 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 KLHL23Q8NBE8 558 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 ACO2Q99798 780 aaKnown RBP12.58□□□□□ -0.4
HLA-B-254ENST00000497377 NXF3Q9H4D5 531 aaKnown RBP12.58□□□□□ -0.4
HLA-B-254ENST00000497377 ST6GALNAC4Q9H4F1 302 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 ZHX3Q9H4I2 956 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 TBC1D13Q9NVG8 400 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 INPP5FQ9Y2H2 1132 aa12.58□□□□□ -0.4
HLA-B-254ENST00000497377 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 ARL5CA6NH57 179 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 MEIS3P2A8K0S8 358 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 K7ENM7 598 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 TOM1L1O75674 476 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 FGF18O76093 207 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 EDN1P05305 212 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 ITGB1P05556 798 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 KRT17Q04695 432 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 PDE12Q6L8Q7 609 aaKnown RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 CNNM4Q6P4Q7 775 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 CCDC65Q8IXS2 484 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 THNSL1Q8IYQ7 743 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms