RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CABP7Q86V35 215 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 NME8Q8N427 588 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 IGSF22Q8N9C0 903 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 CALML4Q96GE6 196 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 PCYT2Q99447 389 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 C11orf84Q9BUA3 381 aaPredicted RBP13.49□□□□□ -0.25
UPF3A-210ENST00000493727 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
UPF3A-210ENST00000493727 CLDND1Q9NY35 253 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 TRPV2Q9Y5S1 764 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 DMDP11532 3685 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 ADGRA3Q8IWK6 1321 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 KDM3AQ9Y4C1 1321 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
UPF3A-210ENST00000493727 LZTS3O60299 673 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-210ENST00000493727 ATG7O95352 703 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 SNRPBP14678 240 aaKnown RBP13.48□□□□□ -0.25
UPF3A-210ENST00000493727 PFKFB1P16118 471 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 CDC25AP30304 524 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 CTNNB1P35222 781 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 DLX2Q07687 328 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-210ENST00000493727 PLCB4Q15147 1175 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 CYP2U1Q7Z449 544 aa13.48□□□□□ -0.25
UPF3A-210ENST00000493727 SMAP1Q8IYB5 467 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-210ENST00000493727 COL1A2P08123 1366 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 KMT2EQ8IZD2 1858 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 SMIM35A0A1B0GVV1 85 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 ENPP3O14638 875 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 HBP1O60381 514 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 TBX10O75333 385 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 PSAPP07602 524 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 STAG3L1P0CL83 205 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 BMPR1AP36894 532 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 SYKP43405 635 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 SPIRE1Q08AE8 756 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 HYAL1Q12794 435 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 NCOA4Q13772 614 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 EPHA7Q15375 998 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 HERC4Q5GLZ8 1057 aaPredicted RBP13.47□□□□□ -0.25
UPF3A-210ENST00000493727 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 PDILTQ8N807 584 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 RDM1Q8NG50 284 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
UPF3A-210ENST00000493727 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
UPF3A-210ENST00000493727 PYM1Q9BRP8 204 aaKnown RBP13.47□□□□□ -0.25
UPF3A-210ENST00000493727 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
UPF3A-210ENST00000493727 GOLPH3LQ9H4A5 285 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 DISC1Q9NRI5 854 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
UPF3A-210ENST00000493727 IGSF9BQ9UPX0 1349 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 IGKV6D-21A0A0A0MT36 114 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 EML1O00423 815 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 BACH1O14867 736 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 GRM6O15303 877 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 MBTPS2O43462 519 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 SLC26A4O43511 780 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 KINO60870 393 aaKnown RBP13.46□□□□□ -0.25
UPF3A-210ENST00000493727 DGKIO75912 1065 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 CCNE2O96020 404 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 LIG1P18858 919 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 STAT6P42226 847 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 NDUFA8P51970 172 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 CYP4A11Q02928 519 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 FAM160A1Q05DH4 1040 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 PAK2Q13177 524 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 BTG3Q14201 252 aaPredicted RBP13.46□□□□□ -0.25
UPF3A-210ENST00000493727 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.25
UPF3A-210ENST00000493727 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 RRAGBQ5VZM2 374 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 MTHFD1LQ6UB35 978 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 DHX58Q96C10 678 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
UPF3A-210ENST00000493727 DYDC2Q96IM9 177 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 PANK2Q9BZ23 570 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 CELF4Q9BZC1 486 aaKnown RBP13.46□□□□□ -0.25
UPF3A-210ENST00000493727 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
UPF3A-210ENST00000493727 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 CD52P31358 61 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 CAMK1Q14012 370 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 EML3Q32P44 896 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 ZNF484Q5JVG2 852 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 B3GNT9Q6UX72 402 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 ABHD15Q6UXT9 468 aa13.45□□□□□ -0.26
UPF3A-210ENST00000493727 CMTR2Q8IYT2 770 aaKnown RBP13.45□□□□□ -0.26
UPF3A-210ENST00000493727 CEP57L1Q8IYX8 460 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms