RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 TMOD1P28289 359 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 SH3PXD2AQ5TCZ1 1133 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 PHKBQ93100 1093 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 LENG9Q96B70 501 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
CACNA1C-228ENST00000492150 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 C1RP00736 705 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 OATP04181 439 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 UGCGQ16739 394 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 PRR16Q569H4 304 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 DAB2IPQ5VWQ8 1189 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
CACNA1C-228ENST00000492150 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 EDIL3O43854 480 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 CIITAP33076 1130 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 PHKA2P46019 1235 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 CXCL12P48061 93 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 FNTBP49356 437 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 PRKCEQ02156 737 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 DRP2Q13474 957 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 CEP68Q76N32 757 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 LPPQ93052 612 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 DACT1Q9NYF0 836 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 TCEAL9Q9UHQ7 104 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 RAI2Q9Y5P3 530 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 KALRNO60229 2985 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 SHROOM3Q8TF72 1996 aa13.16□□□□□ -0.3
CACNA1C-228ENST00000492150 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 AXIN1O15169 862 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 B4GALT3O60512 393 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 RFPL2O75678 378 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 C1QL1O75973 258 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 ADH1AP07327 375 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 GALTP07902 379 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 HOXA6P31267 233 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 REXO1Q8N1G1 1221 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 SCLT1Q96NL6 688 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 C6orf50Q9HD87 102 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
CACNA1C-228ENST00000492150 MAN2B1O00754 1011 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 MSH4O15457 936 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 GLUD1P00367 558 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 RCAN1P53805 252 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 SATB1Q01826 763 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 EDEM2Q9BV94 578 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
CACNA1C-228ENST00000492150 COL4A2P08572 1712 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 A0A087WZ62 844 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 IGKV6-21A0A0C4DH24 114 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 TMEM150BA6NC51 233 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 K7ESF4 209 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms