RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CYP26C1Q6V0L0 522 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 C15orf39Q6ZRI6 1047 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 C12orf76Q8N812 135 aaPredicted RBP9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 FEZF2Q8TBJ5 459 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 HDAC7Q8WUI4 952 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 SNX27Q96L92 541 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 FBXL18Q96ME1 805 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 RIPOR3Q96MK2 946 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 FAM193BQ96PV7 902 aaPredicted RBP9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 HERC2P3Q9BVR0 1158 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 APOL5Q9BWW9 433 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 NXF3Q9H4D5 531 aaKnown RBP9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 PRMT7Q9NVM4 692 aaPredicted RBP9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 SSX2IPQ9Y2D8 614 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 NR2E1Q9Y466 385 aa9.28□□□□□ -0.92
SMARCB1-207ENST00000491967 C2CD4DB7Z1M9 353 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 F8W810 466 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 ACKR2O00590 384 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 TEX28O15482 410 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 USO1O60763 962 aaKnown RBP9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 ATP2B1P20020 1258 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 PRPHP41219 470 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 NAMPTP43490 491 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 SCNN1GP51170 649 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 FOSBP53539 338 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 GRIK3Q13003 919 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 IL17AQ16552 155 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 RARS2Q5T160 578 aaKnown RBP9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 HACE1Q8IYU2 909 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 FBXL6Q8N531 539 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 ERMNQ8TAM6 284 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 GPR62Q9BZJ7 368 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 GBP3Q9H0R5 595 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 C2orf40Q9H1Z8 148 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 PDZD7Q9H5P4 517 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 SFXN1Q9H9B4 322 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 FNIP2Q9P278 1114 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 STK24Q9Y6E0 443 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
SMARCB1-207ENST00000491967 LAD1O00515 517 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 PTGESO14684 152 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 N4BP3O15049 544 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 NPTXRO95502 500 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 EDN1P05305 212 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 WEE2P0C1S8 567 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 AKAP5P24588 427 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 GLUD2P49448 558 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 EFNA5P52803 228 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 NUBP1P53384 320 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 NHLH1Q02575 133 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 PTGDRQ13258 359 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 RABEP1Q15276 862 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 XKR4Q5GH76 650 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 IER5LQ5T953 404 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 HAUS3Q68CZ6 603 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 CABP7Q86V35 215 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 KIFAP3Q92845 792 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 KCNN1Q92952 543 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 PRRX2Q99811 253 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 NTPCRQ9BSD7 190 aaKnown RBP9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 MMTAG2Q9BU76 263 aaKnown RBP9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 COLEC11Q9BWP8 271 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 PTPRHQ9HD43 1115 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 SORCS3Q9UPU3 1222 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
SMARCB1-207ENST00000491967 ARHGEF35A5YM69 484 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 LRRIQ4A6NIV6 560 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 NR1I2O75469 434 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 BRD1O95696 1058 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 URODP06132 367 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 ADH1AP07327 375 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 KLRC2P26717 231 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 OR1G1P47890 313 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 TUSC3Q13454 348 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 PRPF4BQ13523 1007 aaKnown RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 NBR1Q14596 966 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 MAPK6Q16659 721 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 HYIQ5T013 277 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 NT5DC1Q5TFE4 455 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 FUT10Q6P4F1 479 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 CD300LGQ6UXG3 332 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 ALKAL1Q6UXT8 129 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 C1orf186Q6ZWK4 172 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 CDR2LQ86X02 465 aaPredicted RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 ZBTB8OSQ8IWT0 167 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 DAW1Q8N136 415 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 KREMEN2Q8NCW0 462 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 ZNF707Q96C28 371 aaPredicted RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 CCDC43Q96MW1 224 aaKnown RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 TRIM6Q9C030 488 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms