RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PTPN22Q9Y2R2 807 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 ARFGEF1Q9Y6D6 1849 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 ACSL3O95573 720 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 GNAZP19086 355 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 CCDC15Q0P6D6 951 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 MPP2Q14168 576 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 RRP1BQ14684 758 aaKnown RBP20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 THEMIS2Q5TEJ8 643 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 SLC16A10Q8TF71 515 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 ZSWIM1Q9BR11 485 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 PPP1R1BQ9UD71 204 aaPredicted RBP20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 LRRC42Q9Y546 428 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 ANKRD33BA6NCL7 494 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 SLC26A4O43511 780 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 GGPS1O95749 300 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 FESP07332 822 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 C11orf63Q6NUN7 778 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 ECHDC2Q86YB7 292 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 RHOT2Q8IXI1 618 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 FBF1Q8TES7 1133 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 GPR88Q9GZN0 384 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 PASKQ96RG2 1323 aa20.74■□□□□ 0.91
SNAPC3-206ENST00000490969 FOXO6A8MYZ6 492 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 COILP38432 576 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 NOVP48745 357 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 CTCFP49711 727 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 PSMC6P62333 389 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 TCP10Q12799 353 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 BMT2Q1RMZ1 405 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 ASPRV1Q53RT3 343 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 HHIPL2Q6UWX4 724 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 RNPEPL1Q9HAU8 725 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 TXLNGQ9NUQ3 528 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 AHCYL1O43865 530 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 PPP1R11O60927 126 aaPredicted RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 RAD17O75943 681 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 SNUPNO95149 360 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 TTLL1O95922 423 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 STX2P32856 288 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 RBM5P52756 815 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 RBBP5Q15291 538 aaKnown RBP20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 SEL1L2Q5TEA6 688 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 BORCS6Q96GS4 357 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 GPCPD1Q9NPB8 672 aa20.73■□□□□ 0.91
SNAPC3-206ENST00000490969 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 FAM196BA6NMK8 535 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 TMEM110-MUSTN1A8MSY1 372 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 BRAFP15056 766 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 CALCOCO2Q13137 446 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 ACVR2BQ13705 512 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 CYP1B1Q16678 543 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 ANO7Q6IWH7 933 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 CTTNBP2NLQ9P2B4 639 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 FRMPD4Q14CM0 1322 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 TCRBV7S2A1N4TA0A589 114 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 DPPA5A6NC42 116 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 UPP2O95045 317 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 CALB2P22676 271 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 KCNA1Q09470 495 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 MTFR1Q15390 333 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 PARP6Q2NL67 630 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 CATSPER3Q86XQ3 398 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 AAASQ9NRG9 546 aa20.72■□□□□ 0.91
SNAPC3-206ENST00000490969 NEFHP12036 1026 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 KCNJ1P48048 391 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 RWDD2BP57060 319 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 CTTNQ14247 550 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 LRRC47Q8N1G4 583 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 SLC17A8Q8NDX2 589 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 MAGEB18Q96M61 343 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 E7ENQ6 273 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 MEIS1O00470 390 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 PEX11AO75192 247 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 GCNT3O95395 438 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 PECAM1P16284 738 aaPredicted RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 FMO5P49326 533 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 PEX5P50542 639 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 GABPAQ06546 454 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 FAM186BQ8IYM0 893 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 LRMDAQ9H2I8 198 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 ETAA1Q9NY74 926 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 MTUS1Q9ULD2 1270 aa20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 ZMYND8Q9ULU4 1186 aaPredicted RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 ZBTB12Q9Y330 459 aaPredicted RBP20.71■□□□□ 0.91
SNAPC3-206ENST00000490969 RSPH10B2B2RC85 870 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 RSPH10BP0C881 870 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 PYGMP11217 842 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 RAD23BP54727 409 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 SLC30A9Q6PML9 568 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 PIGOQ8TEQ8 1089 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 GRAMD1AQ96CP6 724 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms