RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	EFCAB12	Q6NXP0	572 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	MTHFD1L	Q6UB35	978 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	TSHZ1	Q6ZSZ6	1077 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	EP400NL	Q6ZTU2	488 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	HAUS6	Q7Z4H7	955 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	TMEM161B	Q8NDZ6	487 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	ASAP3	Q8TDY4	903 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	PRPF31	Q8WWY3	499 aa	Known RBP	19.91	■□□□□ 0.78
SRM-206	ENST00000490101	PSPC1	Q8WXF1	523 aa	Known RBP	19.91	■□□□□ 0.78
SRM-206	ENST00000490101	HVCN1	Q96D96	273 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	KCTD10	Q9H3F6	313 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	KMT5A	Q9NQR1	393 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	NFE2L3	Q9Y4A8	694 aa		19.91	■□□□□ 0.78
SRM-206	ENST00000490101	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	CCDC169	A6NNP5	214 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101		H0YCG3	227 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101		K7ENM7	598 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	ENPP3	O14638	875 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	SLC16A4	O15374	487 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	ASAP2	O43150	1006 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	DRP2	Q13474	957 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	KNOP1	Q1ED39	458 aa	Known RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	TIGD5	Q53EQ6	642 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	ANKRD40	Q6AI12	368 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	LRRC71	Q8N4P6	559 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	DUSP9	Q99956	384 aa	Known RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	HSD3B7	Q9H2F3	369 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	AGO3	Q9H9G7	860 aa	Known RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	FANCL	Q9NW38	375 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101	SUCLA2	Q9P2R7	463 aa	Predicted RBP	19.9	■□□□□ 0.78
SRM-206	ENST00000490101	ADGRA3	Q8IWK6	1321 aa		19.9	■□□□□ 0.78
SRM-206	ENST00000490101		M0QZ92	97 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	PDXK	O00764	312 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	CSPG5	O95196	566 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TMOD1	P28289	359 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	RALGAPA2	Q2PPJ7	1873 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TCEAL5	Q5H9L2	206 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	PPP4R3CP	Q6ZMV5	832 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	NELFCD	Q8IXH7	590 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	NOC3L	Q8WTT2	800 aa	Known RBP	19.89	■□□□□ 0.77
SRM-206	ENST00000490101	ACCS	Q96QU6	501 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TSG101	Q99816	390 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	C1QTNF1	Q9BXJ1	281 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	EPHX3	Q9H6B9	360 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	ARHGAP28	Q9P2N2	729 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TRAF3IP3	Q9Y228	551 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TRPV2	Q9Y5S1	764 aa		19.89	■□□□□ 0.77
SRM-206	ENST00000490101	TRIM49B	A6NDI0	452 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101		H3BQ06	376 aa	Predicted RBP	19.88	■□□□□ 0.77
SRM-206	ENST00000490101	ZNF18	P17022	549 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	IBSP	P21815	317 aa	Predicted RBP	19.88	■□□□□ 0.77
SRM-206	ENST00000490101	CLCN3	P51790	818 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	LAMTOR4	Q0VGL1	99 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	CAPS	Q13938	189 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	BTG3	Q14201	252 aa	Predicted RBP	19.88	■□□□□ 0.77
SRM-206	ENST00000490101	TPD52L1	Q16890	204 aa	Predicted RBP	19.88	■□□□□ 0.77
SRM-206	ENST00000490101	LEXM	Q3ZCV2	418 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	CDKAL1	Q5VV42	579 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	METTL13	Q8N6R0	699 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	19.88	■□□□□ 0.77
SRM-206	ENST00000490101	LINC01599	Q8WXQ3	324 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	TMEM206	Q9H813	350 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	MYO7A	Q13402	2215 aa		19.88	■□□□□ 0.77
SRM-206	ENST00000490101	ZMYM2	Q9UBW7	1377 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	RPLP2	P05387	115 aa	Known RBP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	POU5F1B	Q06416	359 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	KCNA1	Q09470	495 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	EDRF1	Q3B7T1	1238 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	PTCRA	Q6ISU1	281 aa	Predicted RBP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	DEPTOR	Q8TB45	409 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	KHSRP	Q92945	711 aa	Known RBP eCLIP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	THAP9	Q9H5L6	903 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	NSUN3	Q9H649	340 aa	Known RBP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	SAMSN1	Q9NSI8	373 aa	Known RBP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	TYW1	Q9NV66	732 aa	Known RBP	19.87	■□□□□ 0.77
SRM-206	ENST00000490101	TBX20	Q9UMR3	447 aa		19.87	■□□□□ 0.77
SRM-206	ENST00000490101	EVPL	Q92817	2033 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	SMIM35	A0A1B0GVV1	85 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	DENND3	A2RUS2	1198 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	LRRIQ4	A6NIV6	560 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	IL9	P15248	144 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	BMPR1A	P36894	532 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	EFNA5	P52803	228 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	SNRPF	P62306	86 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	PAK2	Q13177	524 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	TFDP1	Q14186	410 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	NFIL3	Q16649	462 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	SARM1	Q6SZW1	724 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	MAP4K3	Q8IVH8	894 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	ZC3H3	Q8IXZ2	948 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	KIAA0319L	Q8IZA0	1049 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	CSGALNACT2	Q8N6G5	542 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	GOLGA5	Q8TBA6	731 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	C11orf84	Q9BUA3	381 aa	Predicted RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	KIFC3	Q9BVG8	833 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	SRRT	Q9BXP5	876 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	CELF4	Q9BZC1	486 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	GBP3	Q9H0R5	595 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	TMEM134	Q9H6X4	195 aa		19.86	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms