RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ZSCAN5DPP0CG00 497 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 SOX10P56693 466 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 OVGP1Q12889 678 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-211ENST00000486901 LENG9Q96B70 501 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
HSPG2-211ENST00000486901 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
HSPG2-211ENST00000486901 ZMYM2Q9UBW7 1377 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 AGTP01019 485 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 SP4Q02446 784 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 CPA5Q8WXQ8 436 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 PGM2Q96G03 612 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ADAM22Q9P0K1 906 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ARAP2Q8WZ64 1704 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 AFF2P51816 1311 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 FOXN2P32314 431 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ANKRD20A2Q5SQ80 823 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ANKRD20A1Q5TYW2 823 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ANKRD20A3Q5VUR7 823 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 TAOK1Q7L7X3 1001 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 GSTA5Q7RTV2 222 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 LONP2Q86WA8 852 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 SLC13A5Q86YT5 568 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 TTC8Q8TAM2 541 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 PITPNM3Q9BZ71 974 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 F5H6K3 240 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ASAP2O43150 1006 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ENTPD5O75356 428 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 SLITRK3O94933 977 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 CYP3A4P08684 503 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 NUDT17P0C025 328 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 BMP3P12645 472 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 PCK1P35558 622 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ECHDC2Q86YB7 292 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 SLFN12Q8IYM2 578 aa13.26□□□□□ -0.29
HSPG2-211ENST00000486901 NAP1L3Q99457 506 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-211ENST00000486901 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 MAP3K13O43283 966 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 ETS1P14921 441 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 GPC5P78333 572 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CAPRIN2Q6IMN6 1127 aaKnown RBP13.25□□□□□ -0.29
HSPG2-211ENST00000486901 PPP1R12CQ9BZL4 782 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 KLHL14Q9P2G3 628 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 ANAPC7Q9UJX3 599 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 RASA4BC9J798 803 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CES2O00748 559 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 RASA4O43374 803 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CD58P19256 250 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CHRNA3P32297 505 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 JAG1P78504 1218 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CRYMQ14894 314 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CGB2Q6NT52 195 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CDC42EP5Q6NZY7 148 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
HSPG2-211ENST00000486901 SEC14L1Q92503 715 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 WDR18Q9BV38 432 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 ARP10275 920 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 GHRP10912 638 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 EPHB2P29323 1055 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 RAD23BP54727 409 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 LACTBP83111 547 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-211ENST00000486901 BFSP1Q12934 665 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-211ENST00000486901 ATP13A4Q4VNC1 1196 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 DTX3LQ8TDB6 740 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
HSPG2-211ENST00000486901 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 KIF1CO43896 1103 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 GAS7O60861 476 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 HIP1RO75146 1068 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 KRT15P19012 456 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ABL2P42684 1182 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ECE1P42892 770 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ATP11AP98196 1134 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 ICA1Q05084 483 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 BIRC2Q13490 618 aa13.24□□□□□ -0.29
HSPG2-211ENST00000486901 DHX34Q14147 1143 aaKnown RBP13.24□□□□□ -0.29
HSPG2-211ENST00000486901 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms