RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 APBB2Q92870 758 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CEP63Q96MT8 703 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 EIF2AQ9BY44 585 aaKnown RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 LTBP2Q14767 1821 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 MAPK13O15264 365 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 OGTO15294 1046 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 EXTL3O43909 919 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 AKAP3O75969 853 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 RAG1P15918 1043 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 CASP4P49662 377 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 CYP2J2P51589 502 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 MARSP56192 900 aaKnown RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 ADAM9Q13443 819 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 TMEM132AQ24JP5 1023 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 ZBTB41Q5SVQ8 909 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 IRF2BP1Q8IU81 584 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 GPD1LQ8N335 351 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 CEP120Q8N960 986 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 XXYLT1Q8NBI6 393 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 DBF4BQ8NFT6 615 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 SEPT8Q92599 483 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 EEF2KMTQ96G04 330 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 ADPGKQ9BRR6 497 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 MKNK1Q9BUB5 465 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 MSTO1Q9BUK6 570 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 FTHL17Q9BXU8 183 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 RBSNQ9H1K0 784 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 PCIF1Q9H4Z3 704 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 THAP9Q9H5L6 903 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 SAMSN1Q9NSI8 373 aaKnown RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
MCF2L-227ENST00000486806 AGO2Q9UKV8 859 aaKnown RBP10.45□□□□□ -0.74
MCF2L-227ENST00000486806 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 CETN3O15182 167 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 MEFVO15553 781 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 EVI5O60447 810 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 EXOC3O60645 756 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 NPTXRO95502 500 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 ADRB2P07550 413 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 PFKMP08237 780 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 HARSP12081 509 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 CSF2RAP15509 400 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 ATF7P17544 494 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 GRM5P41594 1212 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 MCCD1P59942 119 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 SNRNP35Q16560 246 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 TWF2Q6IBS0 349 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 CNKSR3Q6P9H4 555 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 APBB1IPQ7Z5R6 666 aaPredicted RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 FILIP1Q7Z7B0 1213 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 ZBTB33Q86T24 672 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 CBWD2Q8IUF1 395 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 TMEM199Q8N511 208 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 SMG8Q8ND04 991 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 BORCS6Q96GS4 357 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 SRRTQ9BXP5 876 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 NXF3Q9H4D5 531 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 KIAA1586Q9HCI6 787 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 RGS18Q9NS28 235 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 FAM105AQ9NUU6 356 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 FANCLQ9NW38 375 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 PRKAG2Q9UGJ0 569 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 CPSF3Q9UKF6 684 aaKnown RBP10.44□□□□□ -0.74
MCF2L-227ENST00000486806 IPPQ9Y573 584 aa10.44□□□□□ -0.74
MCF2L-227ENST00000486806 A0A0U1RQF3 1178 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 GOLGA8IPA6NC78 632 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 GOLGA8JA6NMD2 632 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 BECN2A8MW95 431 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 C9IYK1 514 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ZNF623O75123 536 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 GNA14O95837 355 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 LDHAP00338 332 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ZSCAN20P17040 1043 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 PSMC2P35998 433 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 TNFSF9P41273 254 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 MATR3P43243 847 aaKnown RBP eCLIP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ACOT2P49753 483 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 RAB27AP51159 221 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ENPEPQ07075 957 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ENOX2Q16206 610 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 KYAT1Q16773 422 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 TPD52L1Q16890 204 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 SEZ6Q53EL9 994 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 CEP135Q66GS9 1140 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 DEFB128Q7Z7B8 93 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 ZNF598Q86UK7 904 aaKnown RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-227ENST00000486806 BRSK2Q8IWQ3 736 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 TMEM192Q8IY95 271 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 FAM186BQ8IYM0 893 aa10.43□□□□□ -0.74
MCF2L-227ENST00000486806 CNOT6LQ96LI5 555 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms