RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 TMC2Q8TDI7 906 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 UBXN4Q92575 508 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 FAM84AQ96KN4 292 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 ALS2CR12Q96Q35 445 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 TUBB2BQ9BVA1 445 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 TARS2Q9BW92 718 aaKnown RBP15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 DAAM1Q9Y4D1 1078 aa15.77■□□□□ 0.12
PKNOX1-206ENST00000480179 EFCAB8A8MWE9 144 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 BUB1O43683 1085 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 EXTL3O43909 919 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 ADCY3O60266 1144 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 GH1P01241 217 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 SCP2P22307 547 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 ADCYAP1R1P41586 468 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 NAP1L1P55209 391 aaKnown RBP15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 NLRP11P59045 1033 aaKnown RBP15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 GRB14Q14449 540 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 WHAMMP3Q1A5X7 153 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 FAM110CQ1W6H9 321 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 IER5Q5VY09 327 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 PLEKHH3Q7Z736 793 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 TRIM58Q8NG06 486 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 TCP11Q8WWU5 503 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 SEMA4DQ92854 862 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 ZBTB45Q96K62 511 aaPredicted RBP15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 TMEM8AQ9HCN3 771 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 CPA4Q9UI42 421 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 AGO2Q9UKV8 859 aaKnown RBP15.77■□□□□ 0.11
PKNOX1-206ENST00000480179 ZNF233A6NK53 670 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 PIGRP01833 764 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 LGALS2P05162 132 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 SRGAP2CP0DJJ0 459 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 HARSP12081 509 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 ANXA13P27216 316 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 CHMP4BP1P59074 171 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 LAMTOR4Q0VGL1 99 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 LAMC2Q13753 1193 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 KIAA0753Q2KHM9 967 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 KRT39Q6A163 491 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 SRGAP1Q7Z6B7 1085 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 USP37Q86T82 979 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 DNAAF5Q86Y56 855 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 PDCL2Q8N4E4 241 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 CEP112Q8N8E3 955 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 U2AF1L4Q8WU68 220 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 PSPC1Q8WXF1 523 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 ZBTB10Q96DT7 871 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 NOX5Q96PH1 765 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 TMEM106CQ9BVX2 250 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
PKNOX1-206ENST00000480179 ANO9A1A5B4 782 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 SNAI1O95863 264 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 MAPK4P31152 587 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 ACOT2P49753 483 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 SLC26A2P50443 739 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 IGBP1P78318 339 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 KIF22Q14807 665 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 NAB2Q15742 525 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 LMBRD2Q68DH5 695 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 MAMDC4Q6UXC1 1216 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 LNX1Q8TBB1 728 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 KAT5Q92993 513 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 KATNBL1Q9H079 304 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 TMEM134Q9H6X4 195 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 SUCLA2Q9P2R7 463 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 NAGPAQ9UK23 515 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 MYH10P35580 1976 aa15.75■□□□□ 0.11
PKNOX1-206ENST00000480179 ZNF236Q9UL36 1845 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 RBM47A0AV96 593 aaKnown RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 FOXN3O00409 490 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 DDX3XO00571 662 aaKnown RBP eCLIP15.74■□□□□ 0.118e-6■■■□□ 16
PKNOX1-206ENST00000480179 PMM2O15305 246 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 GAS2O43903 313 aaKnown RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 HBP1O60381 514 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 KLRC1P26715 233 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 GTF2H1P32780 548 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 USP8P40818 1118 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 CLCN3P51790 818 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 MCCD1P59942 119 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 ZBTB41Q5SVQ8 909 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 PAPD7Q5XG87 772 aaKnown RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 SLFN12LQ6IEE8 588 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 ALKBH5Q6P6C2 394 aaKnown RBP15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 ZBTB8OSQ8IWT0 167 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 PPM1KQ8N3J5 372 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 TAS1R2Q8TE23 839 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 KCNN1Q92952 543 aa15.74■□□□□ 0.11
PKNOX1-206ENST00000480179 ELMO3Q96BJ8 720 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms