RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 POLR2FP61218 127 aaKnown RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 SP2Q02086 613 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GOLGA8FQ08AF8 430 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GOLGA8DPQ0D2H9 430 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 STRN3Q13033 797 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ASIC2Q16515 512 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 SLC18A3Q16572 532 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CCL15Q16663 113 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 AMHR2Q16671 573 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 PTPN21Q16825 1174 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 DCAF17Q5H9S7 520 aaPredicted RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 UTP14CQ5TAP6 766 aaKnown RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 TCERG1LQ5VWI1 586 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 IER5Q5VY09 327 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 HGSNATQ68CP4 663 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 DPY19L2P1Q6NXN4 242 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CCDC62Q6P9F0 684 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 SEPT14Q6ZU15 432 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 RRAGAQ7L523 313 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CYFIP1Q7L576 1253 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ENOSF1Q7L5Y1 443 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 KIAA1328Q86T90 577 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 DHX37Q8IY37 1157 aaKnown RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 CEP112Q8N8E3 955 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 TRIM58Q8NG06 486 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ATP8B4Q8TF62 1192 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ZNF592Q92610 1267 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 JAKMIP2Q96AA8 810 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 EEF2KMTQ96G04 330 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 RPGRIP1Q96KN7 1286 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 FGD4Q96M96 766 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 SPAG5Q96R06 1193 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CEP89Q96ST8 783 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 CHP1Q99653 195 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GPR20Q99678 358 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 NAPGQ99747 312 aaPredicted RBP7.25□□□□□ -1.25
LDB3-206ENST00000477489 DESI2Q9BSY9 194 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 NFKBIZQ9BYH8 718 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 STK33Q9BYT3 514 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 C2orf40Q9H1Z8 148 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 TXNRD2Q9NNW7 524 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 XPNPEP1Q9NQW7 623 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 HSPBP1Q9NZL4 362 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 GCNT4Q9P109 453 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ARHGAP20Q9P2F6 1191 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 COQ4Q9Y3A0 265 aa7.25□□□□□ -1.25
LDB3-206ENST00000477489 ZSWIM8A7E2V4 1837 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 SLC15A5A6NIM6 579 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 CCDC169A6NNP5 214 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 EFCAB8A8MWE9 144 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 BTBD19C9JJ37 291 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 NOP56O00567 594 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 CLIC2O15247 247 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 SLC16A4O15374 487 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MAGEB2O15479 319 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 EXTL3O43909 919 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 HBP1O60381 514 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 AOC2O75106 756 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 HOXD8P13378 290 aaPredicted RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 PRLRP16471 622 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 TCF7P36402 384 aaPredicted RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 CASP4P49662 377 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 KLK7P49862 253 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 CLDN10P78369 228 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MYL7Q01449 175 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 KCNA1Q09470 495 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 TFDP1Q14186 410 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 GRB14Q14449 540 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 BMS1Q14692 1282 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 MTF1Q14872 753 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 IFI16Q16666 785 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 WHAMMP3Q1A5X7 153 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 ZNF484Q5JVG2 852 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 CCDC122Q5T0U0 273 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MAP1SQ66K74 1059 aaPredicted RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 PLA2G4FQ68DD2 849 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 ZNF787Q6DD87 383 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MOB2Q70IA6 237 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 GPD1LQ8N335 351 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 BRI3BPQ8WY22 251 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 DHX38Q92620 1227 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 MFSD14AQ96MC6 490 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 ALS2CR12Q96Q35 445 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 IFIH1Q9BYX4 1025 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 POLR3FQ9H1D9 316 aaPredicted RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 ERAP1Q9NZ08 941 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 APEX2Q9UBZ4 518 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 REXO2Q9Y3B8 237 aaKnown RBP7.24□□□□□ -1.25
LDB3-206ENST00000477489 PCDHA13Q9Y5I0 950 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MRFAP1Q9Y605 127 aa7.24□□□□□ -1.25
LDB3-206ENST00000477489 MCM3APO60318 1980 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 A0A0A6YYK5 440 aaPredicted RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 ZNF233A6NK53 670 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 HNRNPDLO14979 420 aaKnown RBP7.23□□□□□ -1.25
LDB3-206ENST00000477489 EPHB6O15197 1021 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 CA12O43570 354 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 ADCY3O60266 1144 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 PPFIA4O75335 1185 aa7.23□□□□□ -1.25
LDB3-206ENST00000477489 TACC1O75410 805 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms