RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 OTOP2Q7RTS6 562 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 MAP4K3Q8IVH8 894 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 ZNF507Q8TCN5 953 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 SCFD1Q8WVM8 642 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 ADAM2Q99965 735 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 GDF15Q99988 308 aa18.43■□□□□ 0.54
EPHB4-204ENST00000477446 TARS2Q9BW92 718 aaKnown RBP18.43■□□□□ 0.54
EPHB4-204ENST00000477446 MRPL4Q9BYD3 311 aaKnown RBP18.43■□□□□ 0.54
EPHB4-204ENST00000477446 A0A1B0GUA9 196 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 CCP110O43303 1012 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 TUBB4AP04350 444 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 HOXD13P35453 343 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 STIM1Q13586 685 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 FILIP1LQ4L180 1135 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 PSRC1Q6PGN9 363 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 CDR2LQ86X02 465 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 LINC01599Q8WXQ3 324 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ACCSQ96QU6 501 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ACO2Q99798 780 aaKnown RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 IKZF4Q9H2S9 585 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 KIF2AO00139 706 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ENPP3O14638 875 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ACTN1P12814 892 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 NR1I3Q14994 352 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 TPD52L1Q16890 204 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ATF7IP2Q5U623 682 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 CDKAL1Q5VV42 579 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 NOTUMQ6P988 496 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 FAM43BQ6ZT52 329 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 SMYD4Q8IYR2 804 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 C17orf53Q8N3J3 647 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 ANKRD20A12PQ8NF67 263 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 BICD1Q96G01 975 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 MED15Q96RN5 788 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 TSPYL2Q9H2G4 693 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-204ENST00000477446 PDZD7Q9H5P4 517 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 RGS18Q9NS28 235 aa18.42■□□□□ 0.54
EPHB4-204ENST00000477446 A0A1B0GTH6 734 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 PIGRP01833 764 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
EPHB4-204ENST00000477446 PAK1Q13153 545 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 EEF1DP3Q658K8 133 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 TWF2Q6IBS0 349 aaKnown RBP18.41■□□□□ 0.54
EPHB4-204ENST00000477446 ARMCX5Q6P1M9 558 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 ZPBP2Q6X784 338 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 NELFCDQ8IXH7 590 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 PTPRHQ9HD43 1115 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 EXOC7Q9UPT5 735 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 MAPK8IP1Q9UQF2 711 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 TNFSF13BQ9Y275 285 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 UBE4BO95155 1302 aa18.41■□□□□ 0.54
EPHB4-204ENST00000477446 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.4■□□□□ 0.54
EPHB4-204ENST00000477446 HNRNPDLO14979 420 aaKnown RBP18.4■□□□□ 0.54
EPHB4-204ENST00000477446 BAIAP3O94812 1187 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 LIG4P49917 911 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 ARID5BQ14865 1188 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 UBXN11Q5T124 520 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 SPECC1LQ69YQ0 1117 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 KLHL10Q6JEL2 608 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 SYCP3Q8IZU3 236 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 HERVK_113Q902F9 699 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 ZBTB45Q96K62 511 aaPredicted RBP18.4■□□□□ 0.54
EPHB4-204ENST00000477446 EIF2AQ9BY44 585 aaKnown RBP18.4■□□□□ 0.54
EPHB4-204ENST00000477446 TMEM206Q9H813 350 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 SAMSN1Q9NSI8 373 aaKnown RBP18.4■□□□□ 0.54
EPHB4-204ENST00000477446 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
EPHB4-204ENST00000477446 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 TISP43B9A030 160 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 ANKRD63C9JTQ0 380 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 ABLIM1O14639 778 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 N4BP3O15049 544 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 TOM1L1O75674 476 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 PROZP22891 400 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 PRCPP42785 496 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 TBX2Q13207 712 aaPredicted RBP18.39■□□□□ 0.53
EPHB4-204ENST00000477446 C9orf50Q5SZB4 431 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 SLC39A4Q6P5W5 647 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 SLC27A1Q6PCB7 646 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
EPHB4-204ENST00000477446 SLC24A5Q71RS6 500 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 GUF1Q8N442 669 aaKnown RBP18.39■□□□□ 0.53
EPHB4-204ENST00000477446 NOC3LQ8WTT2 800 aaKnown RBP18.39■□□□□ 0.53
EPHB4-204ENST00000477446 CCDC51Q96ER9 411 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 UBE2OQ9C0C9 1292 aaKnown RBP18.39■□□□□ 0.53
EPHB4-204ENST00000477446 PAXBP1Q9Y5B6 917 aa18.39■□□□□ 0.53
EPHB4-204ENST00000477446 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 C9IYK1 514 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 EFCAB14O75071 495 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 SHHQ15465 462 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 KNOP1Q1ED39 458 aaKnown RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 COBLL1Q53SF7 1204 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 MYRIPQ8NFW9 859 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms