RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 EEF1DP3Q658K8 133 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 CNKSR3Q6P9H4 555 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 PPP4R3CPQ6ZMV5 832 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF720Q7Z2F6 126 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 SRGAP1Q7Z6B7 1085 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 MYCT1Q8N699 235 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 SPATA20Q8TB22 786 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 SEPT8Q92599 483 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 TIGD1Q96MW7 591 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 HAPLN2Q9GZV7 340 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ST6GALNAC4Q9H4F1 302 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 C17orf75Q9HAS0 396 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 PARVGQ9HBI0 331 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 PTPRHQ9HD43 1115 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 AGPAT5Q9NUQ2 364 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 DACT1Q9NYF0 836 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 TBC1D7Q9P0N9 293 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 FAM186AA6NE01 2351 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 COL4A4P53420 1690 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 CACNA1HO95180 2353 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TPRP12270 2363 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 A0A1B0GUA9 196 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ABHD14A-ACY1A0A1B0GW23 586 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 DENND3A2RUS2 1198 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 MEIS3P2A8K0S8 358 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TISP43B9A030 160 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 INO80B-WBP1J3KQ70 363 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ACKR2O00590 384 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TRAK2O60296 914 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TBCAO75347 108 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 FAM13AO94988 1023 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 KRT18P05783 430 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 PFKMP08237 780 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 MYBP10242 640 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 IDEP14735 1019 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 GAP43P17677 238 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 BMP6P22004 513 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 MCM4P33991 863 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 NBL1P41271 181 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 SARSP49591 514 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 WDR5P61964 334 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ASIC1P78348 528 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 GTF2BQ00403 316 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 STK4Q13043 487 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 PAK2Q13177 524 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TFDP1Q14186 410 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ACAP1Q15027 740 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 PPP2R5AQ15172 486 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 SLC39A4Q6P5W5 647 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 UNC13DQ70J99 1090 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 EPM2AIP1Q7L775 607 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CATSPER4Q7RTX7 472 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 HAUS6Q7Z4H7 955 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 FRMD5Q7Z6J6 570 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF598Q86UK7 904 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CDR2LQ86X02 465 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 HERC6Q8IVU3 1022 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CEP57L1Q8IYX8 460 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 KIAA0895Q8NCT3 520 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CNNM3Q8NE01 707 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 DEPTORQ8TB45 409 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CPB2Q96IY4 423 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ZBTB45Q96K62 511 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 IFT74Q96LB3 600 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 SCLT1Q96NL6 688 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 GBP4Q96PP9 640 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ADAM2Q99965 735 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 PYM1Q9BRP8 204 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TARS2Q9BW92 718 aaKnown RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 INO80BQ9C086 356 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ZHX3Q9H4I2 956 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 TMEM134Q9H6X4 195 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 KMT5AQ9NQR1 393 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 OLFML3Q9NRN5 406 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 RNF19AQ9NV58 838 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 PANK4Q9NVE7 773 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 MYO15AQ9UKN7 3530 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 CNTNAP2Q9UHC6 1331 aa7.69□□□□□ -1.18
LIMD1-204ENST00000474665 ANK1P16157 1881 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 TRIOO75962 3097 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 CHD6Q8TD26 2715 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PVALEFA0A1B0GWK0 134 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 K7ERI5 159 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 GPR182O15218 404 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 MEFVO15553 781 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 RPN1P04843 607 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PRKCBP05771 671 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PROZP22891 400 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 SFPQP23246 707 aaKnown RBP eCLIP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 ADSSP30520 456 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 EFNA5P52803 228 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 ZXDAP98168 799 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 AMPD3Q01432 767 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 IKBKEQ14164 716 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 POSTNQ15063 836 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 KMT5BQ4FZB7 885 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 ELOA2Q8IYF1 753 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 SCFD1Q8WVM8 642 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms