RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 AAK1Q2M2I8 961 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC14Q49A88 953 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PRR16Q569H4 304 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ODF2Q5BJF6 829 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM205BPQ63HN1 556 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 SLC30A6Q6NXT4 461 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM9CQ8IZT9 166 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 MYCT1Q8N699 235 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ZBTB8BQ8NAP8 495 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CPLX3Q8WVH0 158 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CATSPER2Q96P56 530 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TRIM5Q9C035 493 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 C2orf40Q9H1Z8 148 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 EHD1Q9H4M9 534 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ACAD9Q9H845 621 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 COPRSQ9NQ92 184 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PLSCR4Q9NRQ2 329 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 HOMER3Q9NSC5 361 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CHORDC1Q9UHD1 332 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TRHDEQ9UKU6 1024 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TNKSO95271 1327 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CEP162Q5TB80 1403 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 MAST4O15021 2626 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 C4BP0C0L5 1744 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PHF20L1A8MW92 1017 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 NPPAP01160 153 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 IL2RBP14784 551 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 SOX9P48436 509 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ARFIP1P53367 373 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC38Q502W7 563 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 DCAF17Q5H9S7 520 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 AADACL4Q5VUY2 407 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ZNF804AQ7Z570 1209 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 RAB11FIP4Q86YS3 637 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 DIS3LQ8TF46 1054 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 SDF4Q9BRK5 362 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 APOL5Q9BWW9 433 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PHACTR1Q9C0D0 580 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 GBP3Q9H0R5 595 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 MMADHCQ9H3L0 296 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 LIN28AQ9H9Z2 209 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 TBC1D14Q9P2M4 693 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ADGRE2Q9UHX3 823 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 ZBTB21Q9ULJ3 1066 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 PCDHB12Q9Y5F1 795 aa6.59□□□□□ -1.35
SMARCE1-208ENST00000474246 H3BRJ5 948 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SMAD7O15105 426 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MGEA5O60502 916 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PTCD1O75127 700 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF189O75820 626 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MICAL2O94851 1124 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 DLATP10515 647 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CKBP12277 381 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP4AP20648 1035 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ENDOUP21128 410 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MTIF2P46199 727 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 RPIAP49247 311 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 COG7P83436 770 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ACY1Q03154 408 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ODF1Q14990 250 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TERF2Q15554 542 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF792Q3KQV3 632 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 HEATR6Q6AI08 1181 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 LHFPL2Q6ZUX7 228 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 EPM2AIP1Q7L775 607 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 BNIPLQ7Z465 357 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 NOSTRINQ8IVI9 506 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC170Q8IYT3 715 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 NUP93Q8N1F7 819 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ARMC2Q8NEN0 867 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC110Q8TBZ0 833 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SGCZQ96LD1 299 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PRRX2Q99811 253 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 OCSTAMPQ9BR26 566 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 B3GNT4Q9C0J1 378 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 NT5C3AQ9H0P0 336 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 USP40Q9NVE5 1235 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 IFT80Q9P2H3 777 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MTRF1LQ9UGC7 380 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ATPIF1Q9UII2 106 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ZFP37Q9Y6Q3 630 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 IFT172Q9UG01 1749 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF609O15014 1411 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 NSD2O96028 1365 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms