RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 MRPL11Q9Y3B7 192 aaKnown RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 WDR81Q562E7 1941 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 GOLGA6L10A0A0M3HER8 536 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 ASTN2O75129 1339 aaPredicted RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 DRD4P21917 467 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 DHX34Q14147 1143 aaKnown RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 HAUS6Q7Z4H7 955 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 EPS8L3Q8TE67 593 aaKnown RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 CLEC4DQ8WXI8 215 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 DHX38Q92620 1227 aaKnown RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 SAAL1Q96ER3 474 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 ZNF317Q96PQ6 595 aaPredicted RBP11.77□□□□□ -0.52
C9orf3-214ENST00000473778 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.52
C9orf3-214ENST00000473778 PSME4Q14997 1843 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 FAM187AA6NFU0 413 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 ATP9AO75110 1047 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 RTN2O75298 545 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 P4HBP07237 508 aaKnown RBP11.77□□□□□ -0.53
C9orf3-214ENST00000473778 RARAP10276 462 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 ALAS1P13196 640 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 PLS3P13797 630 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 CHN1P15882 459 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 RFX1P22670 979 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 SLCO1A2P46721 670 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 DRG2P55039 364 aaKnown RBP11.77□□□□□ -0.53
C9orf3-214ENST00000473778 SOX10P56693 466 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 MYBPC2Q14324 1141 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 TCEAL1Q15170 157 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 XXYLT1Q8NBI6 393 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 NEK9Q8TD19 979 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 CHURC1Q8WUH1 139 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.53
C9orf3-214ENST00000473778 HERPUD2Q9BSE4 406 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 TRIM7Q9C029 511 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
C9orf3-214ENST00000473778 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-214ENST00000473778 GGA2Q9UJY4 613 aa11.77□□□□□ -0.53
C9orf3-214ENST00000473778 PCNTO95613 3336 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 CAP2P40123 477 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 MXI1P50539 228 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 PEX3P56589 373 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 GTF2BQ00403 316 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 TKFCQ3LXA3 575 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 EGFL6Q8IUX8 553 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 CCDC127Q96BQ5 260 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 NAP1L3Q99457 506 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 NUP85Q9BW27 656 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 AGO4Q9HCK5 861 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 FOXO6A8MYZ6 492 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 MIF4GDA9UHW6 222 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 H0YHG0 523 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 H0YIN7 160 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 RASSF9O75901 435 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 RAD17O75943 681 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 CHRNA3P32297 505 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 PTGER2P43116 358 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 MMP13P45452 471 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 EIF3BP55884 814 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 RASA3Q14644 834 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 ANKRD20A8PQ5CZ79 823 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 SPDYCQ5MJ68 293 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 LLGL2Q6P1M3 1020 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 MICALCLQ6ZW33 695 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 SLC13A5Q86YT5 568 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 DDX1Q92499 740 aaKnown RBP11.76□□□□□ -0.53
C9orf3-214ENST00000473778 SHC3Q92529 594 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 ACCSQ96QU6 501 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 TMEM206Q9H813 350 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 CCPG1Q9ULG6 757 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 TELO2Q9Y4R8 837 aa11.76□□□□□ -0.53
C9orf3-214ENST00000473778 PFASO15067 1338 aa11.75□□□□□ -0.53
C9orf3-214ENST00000473778 RIPK2O43353 540 aa11.75□□□□□ -0.53
C9orf3-214ENST00000473778 MTA2O94776 668 aa11.75□□□□□ -0.53
C9orf3-214ENST00000473778 CCNE2O96020 404 aa11.75□□□□□ -0.53
C9orf3-214ENST00000473778 CYP11B1P15538 503 aa11.75□□□□□ -0.53
C9orf3-214ENST00000473778 MNAT1P51948 309 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms