RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 HDAC5Q9UQL6 1122 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 LCHNA4D1U4 455 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 CREB3O43889 395 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 MAP4K4O95819 1239 aaPredicted RBP4.1□□□□□ -1.75
SNX4-202ENST00000465505 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
SNX4-202ENST00000465505 GPR15P49685 360 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 GZMKP49863 264 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 KPNA1P52294 538 aaPredicted RBP4.1□□□□□ -1.75
SNX4-202ENST00000465505 WNT3AP56704 352 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 PHC1P78364 1004 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 FAM189BP81408 668 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 CSRP2Q16527 193 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 TIGD2Q4W5G0 525 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 WDR78Q5VTH9 848 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 IQSEC1Q6DN90 963 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 KCNV1Q6PIU1 500 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 DOK3Q7L591 496 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 GPRIN1Q7Z2K8 1008 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 LILRA3Q8N6C8 439 aaPredicted RBP4.1□□□□□ -1.75
SNX4-202ENST00000465505 ZNF610Q8N9Z0 462 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 SMC1BQ8NDV3 1235 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 NINJ1Q92982 152 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 MYEOVQ96EZ4 313 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 SENP7Q9BQF6 1050 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 NDC1Q9BTX1 674 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 EPC1Q9H2F5 836 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 MS4A5Q9H3V2 200 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 SPTLC3Q9NUV7 552 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 EIF2B4Q9UI10 523 aaKnown RBP4.1□□□□□ -1.75
SNX4-202ENST00000465505 NUMBLQ9Y6R0 609 aa4.1□□□□□ -1.75
SNX4-202ENST00000465505 ST20-MTHFSA0A0A6YYL1 179 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 CENPVL1A0A0U1RR11 272 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 TMEM200CA6NKL6 621 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 GYPEP15421 78 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 LAG3P18627 525 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 APOBEC3AP31941 199 aaPredicted RBP4.09□□□□□ -1.75
SNX4-202ENST00000465505 LSP1P33241 339 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 HDAC1Q13547 482 aaPredicted RBP4.09□□□□□ -1.75
SNX4-202ENST00000465505 UBE3CQ15386 1083 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 TERF2Q15554 542 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 TKFCQ3LXA3 575 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 CCDC178Q5BJE1 867 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 CNNM4Q6P4Q7 775 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 GIMAP6Q6P9H5 292 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 XYLT1Q86Y38 959 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 SLC41A1Q8IVJ1 513 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 PNISRQ8TF01 805 aaKnown RBP4.09□□□□□ -1.75
SNX4-202ENST00000465505 FERMT2Q96AC1 680 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 GPR101Q96P66 508 aaPredicted RBP4.09□□□□□ -1.75
SNX4-202ENST00000465505 FAM193BQ96PV7 902 aaPredicted RBP4.09□□□□□ -1.75
SNX4-202ENST00000465505 SLC46A2Q9BY10 475 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 TOR3AQ9H497 397 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 PIF1Q9H611 641 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 DKK2Q9UBU2 259 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 PRSS50Q9UI38 385 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 COMMD10Q9Y6G5 202 aa4.09□□□□□ -1.75
SNX4-202ENST00000465505 CCDC194A0A1B0GVG4 234 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 LEFTY2O00292 366 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 TCERG1O14776 1098 aaKnown RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 B3GALT2O43825 422 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 NRP2O60462 931 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 LPXNO60711 386 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 XPAP23025 273 aaPredicted RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 COPB2P35606 906 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 ANP32AP39687 249 aaKnown RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 SCNN1BP51168 640 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 TAP1Q03518 808 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 DUSP2Q05923 314 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 MGAT5Q09328 741 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 MTA1Q13330 715 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 C4orf46Q504U0 113 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 C16orf86Q6ZW13 317 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 DDX46Q7L014 1031 aaKnown RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 ANKRD23Q86SG2 305 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 HOMER1Q86YM7 354 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 SYT12Q8IV01 421 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 RSAD2Q8WXG1 361 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 DCLRE1CQ96SD1 692 aaKnown RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 EVLQ9UI08 416 aaPredicted RBP4.08□□□□□ -1.76
SNX4-202ENST00000465505 CHST2Q9Y4C5 530 aa4.08□□□□□ -1.76
SNX4-202ENST00000465505 ZMYM3Q14202 1370 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 EPB41L2O43491 1005 aaKnown RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 NUDT3O95989 172 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 MANFP55145 182 aaKnown RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 NRG3P56975 720 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 IRX3P78415 501 aaPredicted RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 APBA1Q02410 837 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 TRIM25Q14258 630 aaKnown RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 SEPT7Q16181 437 aaKnown RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 HECTD2Q5U5R9 776 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 DRICH1Q6PGQ1 229 aaPredicted RBP4.07□□□□□ -1.76
SNX4-202ENST00000465505 OLFML1Q6UWY5 402 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 LMBR1LQ6UX01 489 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 BTNL9Q6UXG8 535 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 FRMD7Q6ZUT3 714 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 GDF7Q7Z4P5 450 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 AMOTL1Q8IY63 956 aa4.07□□□□□ -1.76
SNX4-202ENST00000465505 LSM14AQ8ND56 463 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms