RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 CALML4Q96GE6 196 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 CDK5RAP3Q96JB5 506 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 PLEKHG4BQ96PX9 1271 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 SETDB2Q96T68 719 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 DCLRE1BQ9H816 532 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 SIX2Q9NPC8 291 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 OSGEPQ9NPF4 335 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 USP40Q9NVE5 1235 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 HAO1Q9UJM8 370 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 ANKRD63C9JTQ0 380 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 NVLO15381 856 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 PENKP01210 267 aaPredicted RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 H2AFZP0C0S5 128 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 SLC9A1P19634 815 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 TARSP26639 723 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 EPHB2P29323 1055 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 FOXN2P32314 431 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 VHLP40337 213 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 FXR2P51116 673 aaKnown RBP eCLIP6.94□□□□□ -1.3
SIK3-207ENST00000465421 POLE2P56282 527 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 GSTO1P78417 241 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 MYBPC3Q14896 1274 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 LONRF1Q17RB8 773 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 TMEM119Q4V9L6 283 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 LRRC23Q53EV4 343 aaPredicted RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 H2AFVQ71UI9 128 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 KCNK18Q7Z418 384 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 DYDC1Q8WWB3 177 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 ALG3Q92685 438 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 PAIP2Q9BPZ3 127 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 DDX23Q9BUQ8 820 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 AAASQ9NRG9 546 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 SEPT11Q9NVA2 429 aaKnown RBP6.94□□□□□ -1.3
SIK3-207ENST00000465421 TBC1D30Q9Y2I9 924 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 MYO3BQ8WXR4 1341 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 IGSF9BQ9UPX0 1349 aa6.94□□□□□ -1.3
SIK3-207ENST00000465421 FOXO6A8MYZ6 492 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 TCEA3O75764 348 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 LMNAP02545 664 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 CYP1A1P04798 512 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 GALCP54803 685 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 COASYQ13057 564 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 HHATQ5VTY9 493 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 BICDL1Q6ZP65 573 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 OTUD6AQ7L8S5 288 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PTF1AQ7RTS3 328 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PRELID2Q8N945 189 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CXorf38Q8TB03 319 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 GDAP1Q8TB36 358 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 LNX1Q8TBB1 728 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 SLC35G2Q8TBE7 412 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CAMKK2Q96RR4 588 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 SYT11Q9BT88 431 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 RTFDC1Q9BY42 306 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 LRRC4BQ9NT99 713 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PARP2Q9UGN5 583 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 SRP68Q9UHB9 627 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 SCOCQ9UIL1 159 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 RASAL2Q9UJF2 1139 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PODXLO00592 558 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 EDIL3O43854 480 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 TJP3O95049 919 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 PON1P27169 355 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CHRNA3P32297 505 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CACNA2D1P54289 1103 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CLUL1Q15846 466 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 KHDC1Q4VXA5 237 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 TRMT10CQ7L0Y3 403 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 ERP27Q96DN0 273 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 NDNQ99608 321 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 NUDT12Q9BQG2 462 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 LZTS2Q9BRK4 669 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 MTRF1LQ9UGC7 380 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 LNPEPQ9UIQ6 1025 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 ADGRA3Q8IWK6 1321 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 COL2A1P02458 1487 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 RBBP6Q7Z6E9 1792 aaKnown RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 ATP9AO75110 1047 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 GSTT1P30711 240 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 ECM1Q16610 540 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CYP1B1Q16678 543 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 MUM1Q2TAK8 710 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 ZC2HC1CQ53FD0 456 aaPredicted RBP6.93□□□□□ -1.3
SIK3-207ENST00000465421 TMEM63BQ5T3F8 832 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 SOGA3Q5TF21 947 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 TCERG1LQ5VWI1 586 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 AADACL2Q6P093 401 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 C4orf50Q6ZRC1 276 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CYFIP1Q7L576 1253 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 NLGN1Q8N2Q7 840 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 RUNDC3BQ96NL0 473 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
SIK3-207ENST00000465421 IL17RBQ9NRM6 502 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms