RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 BMP5P22003 454 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 MGAT1P26572 445 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 LGALS4P56470 323 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 TAP1Q03518 808 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 DHCR24Q15392 516 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 UGT8Q16880 541 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 CT83Q5H943 113 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 PITRM1Q5JRX3 1037 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 ABHD15Q6UXT9 468 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 KCTD10Q9H3F6 313 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 CYP4F11Q9HBI6 524 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 ENPP3O14638 875 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 ZEB2O60315 1214 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 ULK1O75385 1050 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 LPLP06858 475 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 BPIP17213 487 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 PROZP22891 400 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 PTTG1IPP53801 180 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 COL10A1Q03692 680 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 EFCAB12Q6NXP0 572 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 LILRA3Q8N6C8 439 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-208ENST00000464001 PRDM12Q9H4Q4 367 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 IFT22Q9H7X7 185 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 GPRC5DQ9NZD1 345 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 POGKQ9P215 609 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 ZMYM3Q14202 1370 aa5.88□□□□□ -1.47
ITGB1-208ENST00000464001 CENPVL1A0A0U1RR11 272 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 TBKBP1A7MCY6 615 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 LEFTY2O00292 366 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 PHF2O75151 1096 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 TMEM127O75204 238 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 ITGA10O75578 1167 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 SPATA31D3P0C874 917 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 RBP3P10745 1247 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 CTSSP25774 331 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 ZFP36P26651 326 aaKnown RBP5.87□□□□□ -1.47
ITGB1-208ENST00000464001 SESN3P58005 492 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 RNASE9P60153 205 aaKnown RBP5.87□□□□□ -1.47
ITGB1-208ENST00000464001 NHLH2Q02577 135 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 SPATA31D4Q6ZUB0 917 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
ITGB1-208ENST00000464001 PLXDC1Q8IUK5 500 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 OR10H5Q8NGA6 315 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 MDM1Q8TC05 714 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 RAX2Q96IS3 184 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 ACAP3Q96P50 834 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 TTC1Q99614 292 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
ITGB1-208ENST00000464001 GRID2IPA4D2P6 1211 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 CRHR1P34998 444 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 ADRA1BP35368 520 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 FAM189BP81408 668 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 PDCD1Q15116 288 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 FSCN1Q16658 493 aaKnown RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 HECTD2Q5U5R9 776 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 HDGFL2Q7Z4V5 671 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 NOP9Q86U38 636 aaKnown RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 ARHGEF19Q8IW93 802 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 GPR150Q8NGU9 434 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 ZNF480Q8WV37 535 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 TFAP2CQ92754 450 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 EAF2Q96CJ1 260 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 TOR3AQ9H497 397 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 SERHL2Q9H4I8 314 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 TOPORSQ9NS56 1045 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-208ENST00000464001 CHST2Q9Y4C5 530 aa5.86□□□□□ -1.47
ITGB1-208ENST00000464001 LPXNO60711 386 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 NCR1O76036 304 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 NDUFA10O95299 355 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 NUDT3O95989 172 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 HLA-DOAP06340 250 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 ZSCAN20P17040 1043 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-208ENST00000464001 BMPR1AP36894 532 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 USP14P54578 494 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 GYS2P54840 703 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 BMT2Q1RMZ1 405 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 ANKS6Q68DC2 871 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 DPY19L2P1Q6NXN4 242 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 SUPT20HQ8NEM7 779 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 ZFP28Q8NHY6 868 aa5.85□□□□□ -1.47
ITGB1-208ENST00000464001 NEMP1O14524 444 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 ENPP1P22413 925 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-208ENST00000464001 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.84□□□□□ -1.47
ITGB1-208ENST00000464001 FAM180AQ6UWF9 173 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 SYT12Q8IV01 421 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 LCORLQ8N3X6 602 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 CLRN3Q8NCR9 226 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 ANKFY1Q9P2R3 1169 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 DPP7Q9UHL4 492 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 ZNHIT2Q9UHR6 403 aa5.84□□□□□ -1.47
ITGB1-208ENST00000464001 APOBEC2Q9Y235 224 aaKnown RBP5.84□□□□□ -1.47
ITGB1-208ENST00000464001 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
ITGB1-208ENST00000464001 AVPR1BP47901 424 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 FLT3LGP49771 235 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 MXRA7P84157 204 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms