RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 MAPK13O15264 365 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 CYP1A2P05177 515 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 RARAP10276 462 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 CNGA2Q16280 664 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 ZNF568Q3ZCX4 644 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 GPATCH11Q8N954 259 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 KAT5Q92993 513 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 CBWD1Q9BRT8 395 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 NSRP1Q9H0G5 558 aaKnown RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 CHORDC1Q9UHD1 332 aaPredicted RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 SERPINA10Q9UK55 444 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 TISP43B9A030 160 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 ATMINO43313 823 aaPredicted RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 SLCO1A2P46721 670 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 NBPF9Q3BBW0 867 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 MSL1Q68DK7 614 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 CCDC174Q6PII3 467 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 TRMT10CQ7L0Y3 403 aaKnown RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
PTPN6-204ENST00000456013 ELAC2Q9BQ52 826 aaKnown RBP19■□□□□ 0.63
PTPN6-204ENST00000456013 IPO5O00410 1097 aaKnown RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 SPOPO43791 374 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 ENTPD3O75355 529 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 ECE1P42892 770 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 ELF3P78545 371 aaPredicted RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 NEDD9Q14511 834 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 SLC27A3Q5K4L6 730 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 PLEKHO2Q8TD55 490 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 RIT2Q99578 217 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 NUP85Q9BW27 656 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 RANBP17Q9H2T7 1088 aaKnown RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 CXorf56Q9H5V9 222 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 LRRC19Q9H756 370 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 MCM8Q9UJA3 840 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 PTPN22Q9Y2R2 807 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 MRPL11Q9Y3B7 192 aaKnown RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 ECEL1O95672 775 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 VIMP08670 466 aaKnown RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 KCNJ1P48048 391 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 RWDD2BP57060 319 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 RASA3Q14644 834 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 SLCO2A1Q92959 643 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 MTFR1LQ9H019 292 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 TMEM117Q9H0C3 514 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 ARHGEF10LQ9HCE6 1279 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 HSPBP1Q9NZL4 362 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 UVRAGQ9P2Y5 699 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 GTF3C4Q9UKN8 822 aa18.99■□□□□ 0.63
PTPN6-204ENST00000456013 COL11A2P13942 1736 aaPredicted RBP18.99■□□□□ 0.63
PTPN6-204ENST00000456013 MXI1P50539 228 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 FMO1Q01740 532 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 CALCOCO2Q13137 446 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 RNF207Q6ZRF8 634 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 MIGA2Q7L4E1 593 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 MAEAQ7L5Y9 396 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 TRPM8Q7Z2W7 1104 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 EXOC3L1Q86VI1 746 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 KREMEN1Q96MU8 473 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 TDRD3Q9H7E2 651 aaKnown RBP18.98■□□□□ 0.63
PTPN6-204ENST00000456013 COL2A1P02458 1487 aaPredicted RBP18.98■□□□□ 0.63
PTPN6-204ENST00000456013 CYP26A1O43174 497 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 SLC8A1P32418 973 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 CPNE8Q86YQ8 564 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 SHC3Q92529 594 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 BTBD6Q96KE9 485 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 MXRA8Q9BRK3 442 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 HOMER3Q9NSC5 361 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 WHRNQ9P202 907 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 TMX2Q9Y320 296 aa18.98■□□□□ 0.63
PTPN6-204ENST00000456013 AFF2P51816 1311 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 PLS3P13797 630 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 MCCD1P59942 119 aaPredicted RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 SNRPFP62306 86 aaKnown RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 SLC47A2Q86VL8 602 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 ZNF653Q96CK0 615 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 SCLT1Q96NL6 688 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 CDC42EP4Q9H3Q1 356 aaKnown RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 FSCN2O14926 492 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 TOM1O60784 492 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 P4HBP07237 508 aaKnown RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 IFNAR2P48551 515 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 PDE6CP51160 858 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 MFAP3P55082 362 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 PPP1R7Q15435 360 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 HIBCHQ6NVY1 386 aaPredicted RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 MIER3Q7Z3K6 550 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 CCDC25Q86WR0 208 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 ZSWIM2Q8NEG5 633 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 PSPC1Q8WXF1 523 aaKnown RBP18.97■□□□□ 0.63
PTPN6-204ENST00000456013 CSRNP1Q96S65 589 aa18.97■□□□□ 0.63
PTPN6-204ENST00000456013 C21orf2O43822 256 aa18.96■□□□□ 0.63
PTPN6-204ENST00000456013 SNX3O60493 162 aa18.96■□□□□ 0.63
PTPN6-204ENST00000456013 GTF2BQ00403 316 aa18.96■□□□□ 0.63
PTPN6-204ENST00000456013 CCDC38Q502W7 563 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms