RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 NFIL3Q16649 462 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 QPCTQ16769 361 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SLFN13Q68D06 897 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ALKBH5Q6P6C2 394 aaKnown RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DYMQ7RTS9 669 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NT5DC3Q86UY8 548 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CCDC63Q8NA47 563 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NEK9Q8TD19 979 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 U2AF1L4Q8WU68 220 aaKnown RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TRIB2Q92519 343 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 VTI1AQ96AJ9 217 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RSRC1Q96IZ7 334 aaKnown RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZNF317Q96PQ6 595 aaPredicted RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 FMO2Q99518 471 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 APBA2Q99767 749 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 EBF2Q9HAK2 575 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PAK6Q9NQU5 681 aaPredicted RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 HAUS2Q9NVX0 235 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CNOT8Q9UFF9 292 aaKnown RBP10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 AMFRQ9UKV5 643 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PLXNB2O15031 1838 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RPTORQ8N122 1335 aa10.81□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RLFQ13129 1914 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 LIN7AO14910 233 aaPredicted RBP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SLC25A27O95847 323 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 HOXC6P09630 235 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TMEM253P0C7T8 217 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ALADP13716 330 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 STAT3P40763 770 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 JAM2P57087 298 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PTK2Q05397 1052 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TMEM132BQ14DG7 1078 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 BMT2Q1RMZ1 405 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DUPD1Q68J44 220 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MOXD1Q6UVY6 613 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZNF571Q7Z3V5 609 aaPredicted RBP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 FAM228AQ86W67 206 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CEP120Q8N960 986 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ATP8B4Q8TF62 1192 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ATXN2LQ8WWM7 1075 aaKnown RBP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CUL5Q93034 780 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PACSIN1Q9BY11 444 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PABPC3Q9H361 631 aaKnown RBP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CENPHQ9H3R5 247 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 NOD2Q9HC29 1040 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SAMD15Q9P1V8 674 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 FEM1BQ9UK73 627 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 A0A0G2JMZ2 1700 aa10.8□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PDXKO00764 312 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DAPK3O43293 454 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 WFS1O76024 890 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 BMP3P12645 472 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 UCHL3P15374 230 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RFX1P22670 979 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RPL13P26373 211 aaKnown RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 COPB2P35606 906 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 IRX1P78414 480 aaPredicted RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TRIM32Q13049 653 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZNF268Q14587 947 aaPredicted RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TRADDQ15628 312 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 CCL14Q16627 93 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MAP3K21Q5TCX8 1036 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DENND2CQ68D51 928 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MFSD5Q6N075 450 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 TAOK1Q7L7X3 1001 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DPP9Q86TI2 863 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RIOX2Q8IUF8 465 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ABRAQ8N0Z2 381 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 REPS2Q8NFH8 660 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MORC4Q8TE76 937 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 RFFLQ8WZ73 363 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 GMCL1Q96IK5 515 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ERP44Q9BS26 406 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 DDX47Q9H0S4 455 aaKnown RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ZDHHC18Q9NUE0 388 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 SLC5A4Q9NY91 659 aa10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 MTRF1LQ9UGC7 380 aaKnown RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 ARMCX3Q9UH62 379 aaPredicted RBP10.79□□□□□ -0.68
CHCHD4P3-201ENST00000455954 PACSIN2Q9UNF0 486 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms