RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PTCRAQ6ISU1 281 aaPredicted RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 EP400NLQ6ZTU2 488 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 TAS1R3Q7RTX0 852 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 EFHBQ8N7U6 833 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 REEP2Q9BRK0 252 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 LARSQ9P2J5 1176 aaKnown RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 TFIP11Q9UBB9 837 aaKnown RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 INPP5FQ9Y2H2 1132 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 HES2Q9Y543 173 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 MYH15Q9Y2K3 1946 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 NPHP3-ACAD11A0A0J9YXS1 232 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 SFI1A8K8P3 1242 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 NT5C1B-RDH14C9J2C7 533 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 H0YCG3 227 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 ZC3H11AO75152 810 aaKnown RBP eCLIP19.07■□□□□ 0.64
USP39-208ENST00000455732 IL9P15248 144 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 SCP2P22307 547 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 SMTNP53814 917 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 KRT17Q04695 432 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 DCAF4L1Q3SXM0 396 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 ATF7IP2Q5U623 682 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 RRAGBQ5VZM2 374 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 CCDC73Q6ZRK6 1079 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 RBM23Q86U06 439 aaKnown RBP19.07■□□□□ 0.64
USP39-208ENST00000455732 TMEM173Q86WV6 379 aaPredicted RBP19.07■□□□□ 0.64
USP39-208ENST00000455732 CDR2LQ86X02 465 aaPredicted RBP19.07■□□□□ 0.64
USP39-208ENST00000455732 TMEM161BQ8NDZ6 487 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 ADPGKQ9BRR6 497 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 CFAP45Q9UL16 551 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 TNFSF13BQ9Y275 285 aa19.07■□□□□ 0.64
USP39-208ENST00000455732 ARL5CA6NH57 179 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 SLC16A4O15374 487 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 CUTAO60888 179 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 DDHD2O94830 711 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 GLP2RO95838 553 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 GALTP07902 379 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 MAPTP10636 758 aaKnown RBP19.06■□□□□ 0.64
USP39-208ENST00000455732 LIG1P18858 919 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 MLH1P40692 756 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 NCKAP1LP55160 1127 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 RNASELQ05823 741 aaKnown RBP19.06■□□□□ 0.64
USP39-208ENST00000455732 GIT2Q14161 759 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 DHX8Q14562 1220 aaKnown RBP19.06■□□□□ 0.64
USP39-208ENST00000455732 TMEM132AQ24JP5 1023 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 ZNF280BQ86YH2 543 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 MSLNLQ96KJ4 702 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 TCF25Q9BQ70 676 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 C1QTNF1Q9BXJ1 281 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 MRPL4Q9BYD3 311 aaKnown RBP19.06■□□□□ 0.64
USP39-208ENST00000455732 TLE6Q9H808 572 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 PARVGQ9HBI0 331 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 NGRNQ9NPE2 291 aaKnown RBP19.06■□□□□ 0.64
USP39-208ENST00000455732 DNAJB4Q9UDY4 337 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
USP39-208ENST00000455732 PER2O15055 1255 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 FAM13AO94988 1023 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 DNM1Q05193 864 aaKnown RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 DUSP6Q16828 381 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 AXDND1Q5T1B0 1012 aaPredicted RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 PLPP4Q5VZY2 271 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 EEF1DP3Q658K8 133 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 APBB1IPQ7Z5R6 666 aaPredicted RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 FAM178BQ8IXR5 827 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 IGSF21Q96ID5 467 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 GAD1Q99259 594 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 CDCA3Q99618 268 aaPredicted RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 ACO2Q99798 780 aaKnown RBP19.05■□□□□ 0.64
USP39-208ENST00000455732 TMEM175Q9BSA9 504 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 ENTPD7Q9NQZ7 604 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 CLEC1BQ9P126 229 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 USP20Q9Y2K6 914 aa19.05■□□□□ 0.64
USP39-208ENST00000455732 A0A087X0B3 334 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 HIDE1A8MVS5 230 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 TBCAO75347 108 aaKnown RBP19.04■□□□□ 0.64
USP39-208ENST00000455732 KRT18P05783 430 aaKnown RBP19.04■□□□□ 0.64
USP39-208ENST00000455732 PROZP22891 400 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 STAT6P42226 847 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 SLC11A1P49279 550 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 DSC1Q08554 894 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 KCNC3Q14003 757 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 FOXD4L6Q3SYB3 417 aaPredicted RBP19.04■□□□□ 0.64
USP39-208ENST00000455732 FOXD4L3Q6VB84 417 aaPredicted RBP19.04■□□□□ 0.64
USP39-208ENST00000455732 GSTCDQ8NEC7 633 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 VN1R2Q8NFZ6 395 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 BCL7CQ8WUZ0 217 aaPredicted RBP19.04■□□□□ 0.64
USP39-208ENST00000455732 TMEM169Q96HH4 297 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 ZFP42Q96MM3 310 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 APOL6Q9BWW8 343 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 GBP3Q9H0R5 595 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 RCOR1Q9UKL0 485 aa19.04■□□□□ 0.64
USP39-208ENST00000455732 FSD2A1L4K1 749 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 ABLIM1O14639 778 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 MBTPS2O43462 519 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 POMCP01189 267 aa19.03■□□□□ 0.64
USP39-208ENST00000455732 AKAP5P24588 427 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms