RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DUSP9Q99956 384 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ADAM2Q99965 735 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SH2D3AQ9BRG2 576 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF577Q9BSK1 485 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SLC26A6Q9BXS9 759 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ZMYND12Q9H0C1 365 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 RC3H2Q9HBD1 1191 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 C6orf50Q9HD87 102 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 VPS54Q9P1Q0 977 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KIAA1522Q9P206 1035 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 KANSL3Q9P2N6 904 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 GABBR1Q9UBS5 961 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 ST3GAL5Q9UNP4 418 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 SAMM50Q9Y512 469 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 COL4A6Q14031 1691 aa5.31□□□□□ -1.56
GTF3C3-208ENST00000455546 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TMEM150BA6NC51 233 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TBKBP1A7MCY6 615 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 EIF1AYO14602 144 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 MSH4O15457 936 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 CHMP2AO43633 222 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 PHACTR2O75167 634 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 GPR32O75388 356 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 CSDE1O75534 798 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 HMGB1P09429 215 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 STAG3L1P0CL83 205 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 FGFR1P11362 822 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 FGFR4P22455 802 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 RPS6KB1P23443 525 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TARSP26639 723 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 GNA11P29992 359 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 PDIA3P30101 505 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 NLRP11P59045 1033 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 AKAP17AQ02040 695 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TNP2Q05952 138 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 STK3Q13188 491 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 ADAM15Q13444 863 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TOB2Q14106 344 aaPredicted RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 ENOX2Q16206 610 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TIGD5Q53EQ6 642 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF484Q5JVG2 852 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 SPOUT1Q5T280 376 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 EFCAB12Q6NXP0 572 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 NIPA1Q7RTP0 329 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM228AQ86W67 206 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 REXO1Q8N1G1 1221 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 VWA5B2Q8N398 1253 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 LRRC71Q8N4P6 559 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 C1orf127Q8N9H9 656 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 POF1BQ8WVV4 589 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TNPO1Q92973 898 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 BHMTQ93088 406 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 CCDC136Q96JN2 1154 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 SLC30A3Q99726 388 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 C11orf84Q9BUA3 381 aaPredicted RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 FTHL17Q9BXU8 183 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 ERVK-5Q9HDB9 667 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TYW1Q9NV66 732 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 CNTN3Q9P232 1028 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 FNDC3AQ9Y2H6 1198 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHA10Q9Y5I2 948 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 SQORQ9Y6N5 450 aa5.3□□□□□ -1.56
GTF3C3-208ENST00000455546 TECTAO75443 2155 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 KDM3AQ9Y4C1 1321 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ESYT2A0FGR8 921 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 DENND3A2RUS2 1198 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 C9IYK1 514 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 hCG_1984214I3L0E3 225 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 MBTPS2O43462 519 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF862O60290 1169 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 TBX10O75333 385 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 C22orf31O95567 290 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 MMP1P03956 469 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 RPLP1P05386 114 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 PSAPP07602 524 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 RARAP10276 462 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NFKB1P19838 968 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 PSMA5P28066 241 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 CIITAP33076 1130 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 PBX3P40426 434 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NRIP1P48552 1158 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SARSP49591 514 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SLC26A2P50443 739 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 CLCN3P51790 818 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 CRYBB1P53674 252 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NLRP5P59047 1200 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ERVFC1P60507 584 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ZP2Q05996 745 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SSRP1Q08945 709 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SPEM2Q0P670 501 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 DRP2Q13474 957 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 LBRQ14739 615 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 COL19A1Q14993 1142 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 UGCGQ16739 394 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 LONRF3Q496Y0 759 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF746Q6NUN9 644 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 LRRC55Q6ZSA7 311 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SLC24A5Q71RS6 500 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 RUFY3Q7L099 469 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms