RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NR1I2O75469 434 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 ZSCAN22P10073 491 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 MLH1P40692 756 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 FXR2P51116 673 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 UBXN11Q5T124 520 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 KRT79Q5XKE5 535 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 SNX29Q8TEQ0 813 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 GAD1Q99259 594 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 BHMT2Q9H2M3 363 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 FAM86C2PA6NEL3 165 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 C2orf71A6NGG8 1288 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 ARL5CA6NH57 179 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 PI4K2BG5E9Z4 385 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 LAD1O00515 517 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 B4GALT5O43286 388 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DCXO43602 365 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 SLC11A1P49279 550 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 PDIA5Q14554 519 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 RILPL1Q5EBL4 403 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 SLC27A1Q6PCB7 646 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DDX53Q86TM3 631 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 SMG8Q8ND04 991 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 VN1R2Q8NFZ6 395 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DEPTORQ8TB45 409 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 AUTS2Q8WXX7 1259 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 GLMNQ92990 594 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 IFT74Q96LB3 600 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 C2orf40Q9H1Z8 148 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 ZSCAN16Q9H4T2 348 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DDX19AQ9NUU7 478 aaKnown RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 PRMT7Q9NVM4 692 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 PRG3Q9Y2Y8 225 aaPredicted RBP9.67□□□□□ -0.86
USP6NL-203ENST00000443016 HCFC2Q9Y5Z7 792 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 MYH15Q9Y2K3 1946 aa9.67□□□□□ -0.86
USP6NL-203ENST00000443016 DDHD2O94830 711 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 CYP11B2P19099 503 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 MUTP22033 750 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 FECHP22830 423 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 OR1G1P47890 313 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 GIT2Q14161 759 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 MAPK6Q16659 721 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 CASP10Q92851 521 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 SGSM3Q96HU1 749 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 RPGRIP1Q96KN7 1286 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 ZFP42Q96MM3 310 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 NAP1L5Q96NT1 182 aaPredicted RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 NXF3Q9H4D5 531 aaKnown RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 STK39Q9UEW8 545 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 PARP2Q9UGN5 583 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 DNM3Q9UQ16 869 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 ATG2AQ2TAZ0 1938 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 NPTXRO95502 500 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 F13A1P00488 732 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 CTSAP10619 480 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 HOXB8P17481 243 aaPredicted RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 AKAP5P24588 427 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 SCNN1GP51170 649 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 CBX2Q14781 532 aaPredicted RBP9.66□□□□□ -0.86
USP6NL-203ENST00000443016 PPP2R5AQ15172 486 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 ANKRD54Q6NXT1 300 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 BRAPQ7Z569 592 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 C4orf32Q8N8J7 132 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 RPS6KC1Q96S38 1066 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 TMEM175Q9BSA9 504 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 LRFN3Q9BTN0 628 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 ZBP1Q9H171 429 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
USP6NL-203ENST00000443016 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 NRP1O14786 923 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 GPR37L1O60883 481 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 CDC25AP30304 524 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 BCL7CQ8WUZ0 217 aaPredicted RBP9.65□□□□□ -0.86
USP6NL-203ENST00000443016 KIFAP3Q92845 792 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 PHF7Q9BWX1 381 aaPredicted RBP9.65□□□□□ -0.86
USP6NL-203ENST00000443016 GIT1Q9Y2X7 761 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 ARID2Q68CP9 1835 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 PP2D1A8MPX8 630 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 C2CD2LO14523 706 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 B4GALT3O60512 393 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 PRKCBP05771 671 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 SP100P23497 879 aaPredicted RBP9.65□□□□□ -0.86
USP6NL-203ENST00000443016 NAMPTP43490 491 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 ECM1Q16610 540 aa9.65□□□□□ -0.86
USP6NL-203ENST00000443016 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms