RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ERLEC1Q96DZ1 483 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ACP6Q9NPH0 428 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 EMILIN3Q9NT22 766 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 LRCH1Q9Y2L9 728 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ALG6Q9Y672 507 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 POTECB2RU33 542 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PGM3O95394 542 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 CYP1A1P04798 512 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-214ENST00000441542 TRIM49P0CI25 452 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 TRIM49CP0CI26 452 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 TSPY3P0CV98 308 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 TSPY8P0CW00 308 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ACADSP16219 412 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PON1P27169 355 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ABCD1P33897 745 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 CETN2P41208 172 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 BPIFB4P59827 614 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PSMC1P62191 440 aaKnown RBP8.04□□□□□ -1.12
HDAC9-214ENST00000441542 STRN3Q13033 797 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 RRP1BQ14684 758 aaKnown RBP8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PPP2R5BQ15173 497 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ARHGEF18Q6ZSZ5 1173 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 ZDHHC14Q8IZN3 488 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 RAD54LQ92698 747 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 CLPTM1LQ96KA5 538 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PIGSQ96S52 555 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 VCX3BQ9H321 246 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 VCX3AQ9NNX9 186 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 FBXO6Q9NRD1 293 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-214ENST00000441542 TTC7AQ9ULT0 858 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-214ENST00000441542 NAALADL1Q9UQQ1 740 aa8.04□□□□□ -1.12
HDAC9-214ENST00000441542 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 MAGEB3O15480 346 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 EXOC3O60645 756 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 ZNF189O75820 626 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 CSF1RP07333 972 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 INHBCP55103 352 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 POU5F1Q01860 360 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 KRT17Q04695 432 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 PABPC4Q13310 644 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 LBRQ14739 615 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 MTFR1Q15390 333 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 TRIM59Q8IWR1 403 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 TRIM42Q8IWZ5 723 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 VGLL2Q8N8G2 317 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SLC7A6OSQ96CW6 309 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 MPP4Q96JB8 637 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 KAT6BQ8WYB5 2073 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 DDX3YO15523 660 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 PHF2O75151 1096 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 PYGMP11217 842 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 GYS1P13807 737 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 AMPD1P23109 780 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 PPP1R2P41236 205 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 DAB2IPQ5VWQ8 1189 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 NLRP9Q7RTR0 991 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SLC20A1Q8WUM9 679 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 HES6Q96HZ4 224 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 NGLY1Q96IV0 654 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 MIPEPQ99797 713 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 LRMDAQ9H2I8 198 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 DCLRE1BQ9H816 532 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 AIPL1Q9NZN9 384 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SEC63Q9UGP8 760 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 COG5Q9UP83 839 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 O00370 1275 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 ZSCAN9O15535 394 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 T-ENOLP0DO92 83 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 CHRNB2P17787 502 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 COMTP21964 271 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 CYP2J2P51589 502 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 IGBP1P78318 339 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 CYP4A11Q02928 519 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 DRAP1Q14919 205 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 C2CD6Q53TS8 623 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SLC30A10Q6XR72 485 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 NCAPG2Q86XI2 1143 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 VPS37BQ9H9H4 285 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 C6orf50Q9HD87 102 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 ARL8BQ9NVJ2 186 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 KLHL42Q9P2K6 505 aa8.03□□□□□ -1.12
HDAC9-214ENST00000441542 TDRKHQ9Y2W6 561 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.03□□□□□ -1.12
HDAC9-214ENST00000441542 PASKQ96RG2 1323 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 MAGEA13PA6NCF6 341 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 FAM187AA6NFU0 413 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GOLGA8SH3BPF8 625 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 GOLGA8MH3BSY2 632 aa8.02□□□□□ -1.13
HDAC9-214ENST00000441542 LYNP07948 512 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms