RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KCTD16Q68DU8 428 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
GABPB1-205ENST00000429662 WNT2BQ93097 391 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 RPS6KC1Q96S38 1066 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 RUSC1Q9BVN2 902 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 STMN4Q9H169 189 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-205ENST00000429662 DNAJC18Q9H819 358 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 APEX2Q9UBZ4 518 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 HERC5Q9UII4 1024 aaKnown RBP9.39□□□□□ -0.91
GABPB1-205ENST00000429662 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-205ENST00000429662 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
GABPB1-205ENST00000429662 NFS1Q9Y697 457 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 ATRNL1Q5VV63 1379 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 XIRP2A4UGR9 3374 aa9.39□□□□□ -0.91
GABPB1-205ENST00000429662 MYH7BA7E2Y1 1941 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 IGLV3-22A0A075B6J6 115 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 ZSCAN5CA6NGD5 496 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PODXLO00592 558 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 RAD21O60216 631 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PSMD10O75832 226 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SLITRK3O94933 977 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 GJA8P48165 433 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 ATP1A2P50993 1020 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PPP2R2AP63151 447 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 POU5F1Q01860 360 aaKnown RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 ZNF844Q08AG5 666 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 NFIAQ12857 509 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PLS1Q14651 629 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 INTS8Q75QN2 995 aaKnown RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 FAM160B2Q86V87 743 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SIAH1Q8IUQ4 282 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 FAM178BQ8IXR5 827 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 C12orf56Q8IXR9 622 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 CNPY4Q8N129 248 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SH2D3CQ8N5H7 860 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 LNX1Q8TBB1 728 aaPredicted RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 MYCBPAPQ8TBZ2 947 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 BRI3BPQ8WY22 251 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SYT11Q9BT88 431 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 TIPINQ9BVW5 301 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 INTS2Q9H0H0 1204 aaKnown RBP9.38□□□□□ -0.91
GABPB1-205ENST00000429662 PLEKHA4Q9H4M7 779 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 RAPGEFL1Q9UHV5 662 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 SYNGAP1Q96PV0 1343 aa9.38□□□□□ -0.91
GABPB1-205ENST00000429662 GOLGA6L7A0A1B0GV03 622 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 C5orf60A6NFR6 353 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CLIC2O15247 247 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DDX3YO15523 660 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GAS7O60861 476 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MTA2O94776 668 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 NUDT17P0C025 328 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CHRNA3P32297 505 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 BMP8BP34820 402 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 CASP4P49662 377 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 STAT2P52630 851 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MCCD1P59942 119 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MYL7Q01449 175 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ODF2Q5BJF6 829 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 NIPA1Q7RTP0 329 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TMC3Q7Z5M5 1100 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GPIHBP1Q8IV16 184 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TPH2Q8IWU9 490 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 SAMD3Q8N6K7 520 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 UBLCP1Q8WVY7 318 aaPredicted RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DPF3Q92784 378 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ZBTB9Q96C00 473 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DYDC2Q96IM9 177 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 GUCD1Q96NT3 240 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 FMO2Q99518 471 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 RIT2Q99578 217 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 AGPAT1Q99943 283 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 ERP44Q9BS26 406 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 TEKT3Q9BXF9 490 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 AP1M1Q9BXS5 423 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DDX47Q9H0S4 455 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 DEFB129Q9H1M3 183 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 AGPAT3Q9NRZ7 376 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 MTRF1LQ9UGC7 380 aaKnown RBP9.37□□□□□ -0.91
GABPB1-205ENST00000429662 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
GABPB1-205ENST00000429662 PCDHAC2Q9Y5I4 1007 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms