RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TBK1Q9UHD2 729 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PCYOX1Q9UHG3 505 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TMEM150BA6NC51 233 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ASAP2O43150 1006 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 GHRP10912 638 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CTNNA2P26232 953 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 MXI1P50539 228 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ZNF131P52739 623 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PPP2R5CQ13362 524 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CNGA2Q16280 664 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SGO2Q562F6 1265 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 C11orf63Q6NUN7 778 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 KIRREL3Q8IZU9 778 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 GMCL1P1Q8NEA9 526 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ATG4AQ8WYN0 398 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 P3H4Q92791 437 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 RPS6KC1Q96S38 1066 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 WNT8AQ9H1J5 351 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 NOD2Q9HC29 1040 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 FGFR1OP2Q9NVK5 253 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.121e-17■□□□□ 8.8
SMARCC1-202ENST00000425518 ATP8B3O60423 1300 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PFASO15067 1338 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 CHRNB2P17787 502 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 RWDD2BP57060 319 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 NFIL3Q16649 462 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 KYNUQ16719 465 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 MIER3Q7Z3K6 550 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 XXYLT1Q8NBI6 393 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 PWWP2AQ96N64 755 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM118BQ9BPY3 351 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 CDC42EP4Q9H3Q1 356 aaKnown RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 HOMER3Q9NSC5 361 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 HSPBP1Q9NZL4 362 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 TMEM120BA0PK00 339 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 SLC16A4O15374 487 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 DNAJC8O75937 253 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 UBOX5O94941 541 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 KRT5P13647 590 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 GBP2P32456 591 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 RASA3Q14644 834 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 C2CD6Q53TS8 623 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 PLEKHO2Q8TD55 490 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 SAAL1Q96ER3 474 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 ACCSQ96QU6 501 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 HEMGNQ9BXL5 484 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 WDR11Q9BZH6 1224 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 TMEM117Q9H0C3 514 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 GPRC5CQ9NQ84 441 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 TCP10L2B9ZVM9 353 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 ATP6V1G2O95670 118 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 GBP1P32455 592 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 ELF1P32519 619 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 CHKAP35790 457 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 PEX3P56589 373 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 KRT17Q04695 432 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 SEPT14Q6ZU15 432 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 CROCCP2Q86T23 111 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 KIF2BQ8N4N8 673 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 DHX38Q92620 1227 aaKnown RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 ART4Q93070 314 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM84AQ96KN4 292 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 RUNDC3BQ96NL0 473 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 PAIP2Q9BPZ3 127 aaKnown RBP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 FBXO28Q9NVF7 368 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 STK38LQ9Y2H1 464 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 L3MBTL1Q9Y468 752 aa8.07□□□□□ -1.12
SMARCC1-202ENST00000425518 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MGRN1O60291 552 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 ADCY8P40145 1251 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 PDE6CP51160 858 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 ITIH4Q14624 930 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 TNIP1Q15025 636 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MIGA2Q7L4E1 593 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 HAUS6Q7Z4H7 955 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 CBWD2Q8IUF1 395 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 TMEM206Q9H813 350 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 VEZTQ9HBM0 779 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 CHST7Q9NS84 486 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 MCM8Q9UJA3 840 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 PCDHA3Q9Y5H8 950 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SBF2Q86WG5 1849 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SNX3O60493 162 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 GGPS1O95749 300 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 RFX1P22670 979 aa8.06□□□□□ -1.12
SMARCC1-202ENST00000425518 SLC8A1P32418 973 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms