RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 CD52P31358 61 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 DCAF4L1Q3SXM0 396 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 HSP90AA4PQ58FG1 418 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 ZBTB33Q86T24 672 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 IRF2BP1Q8IU81 584 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 CNOT6LQ96LI5 555 aaKnown RBP17.41■□□□□ 0.38
ABCA1-203ENST00000423487 CDT1Q9H211 546 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 AGO3Q9H9G7 860 aaKnown RBP17.41■□□□□ 0.38
ABCA1-203ENST00000423487 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
ABCA1-203ENST00000423487 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 MAPK13O15264 365 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 OGTO15294 1046 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 EXTL3O43909 919 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 AKAP3O75969 853 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 HARSP12081 509 aaKnown RBP17.4■□□□□ 0.38
ABCA1-203ENST00000423487 CASP4P49662 377 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 KCNJ12Q14500 433 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 MBTPS1Q14703 1052 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 SLC27A1Q6PCB7 646 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 FAM43BQ6ZT52 329 aaPredicted RBP17.4■□□□□ 0.38
ABCA1-203ENST00000423487 CDR2LQ86X02 465 aaPredicted RBP17.4■□□□□ 0.38
ABCA1-203ENST00000423487 CREBRFQ8IUR6 639 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 SAAL1Q96ER3 474 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 FBXL18Q96ME1 805 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 HAPLN2Q9GZV7 340 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 GRPEL1Q9HAV7 217 aa17.4■□□□□ 0.38
ABCA1-203ENST00000423487 METTL14Q9HCE5 456 aaKnown RBP17.4■□□□□ 0.38
ABCA1-203ENST00000423487 ZSCAN20P17040 1043 aaPredicted RBP17.39■□□□□ 0.37
ABCA1-203ENST00000423487 MARSP56192 900 aaKnown RBP17.39■□□□□ 0.37
ABCA1-203ENST00000423487 KYAT1Q16773 422 aa17.39■□□□□ 0.37
ABCA1-203ENST00000423487 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
ABCA1-203ENST00000423487 FRMD5Q7Z6J6 570 aa17.39■□□□□ 0.37
ABCA1-203ENST00000423487 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
ABCA1-203ENST00000423487 ARMCX3Q9UH62 379 aaPredicted RBP17.39■□□□□ 0.37
ABCA1-203ENST00000423487 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
ABCA1-203ENST00000423487 GOLGA8IPA6NC78 632 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 ZNF233A6NK53 670 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 GOLGA8JA6NMD2 632 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 KIAA0355O15063 1070 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 MRE11P49959 708 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 SNRNP35Q16560 246 aaKnown RBP17.38■□□□□ 0.37
ABCA1-203ENST00000423487 TWF2Q6IBS0 349 aaKnown RBP17.38■□□□□ 0.37
ABCA1-203ENST00000423487 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 FAM213AQ9BRX8 229 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 IFIH1Q9BYX4 1025 aaKnown RBP17.38■□□□□ 0.37
ABCA1-203ENST00000423487 OSBPL7Q9BZF2 842 aa17.38■□□□□ 0.37
ABCA1-203ENST00000423487 TRIM6Q9C030 488 aaPredicted RBP17.38■□□□□ 0.37
ABCA1-203ENST00000423487 PRDM5Q9NQX1 630 aaPredicted RBP17.38■□□□□ 0.37
ABCA1-203ENST00000423487 NBNO60934 754 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 NPTXRO95502 500 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 TPM2P07951 284 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 KRT13P13646 458 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 CYP2C18P33260 490 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 MTIF2P46199 727 aaKnown RBP17.37■□□□□ 0.37
ABCA1-203ENST00000423487 CCL23P55773 120 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 INTS8Q75QN2 995 aaKnown RBP17.37■□□□□ 0.37
ABCA1-203ENST00000423487 CBWD2Q8IUF1 395 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 HTATIP2Q9BUP3 242 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 WNT8AQ9H1J5 351 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 LIMA1Q9UHB6 759 aaKnown RBP17.37■□□□□ 0.37
ABCA1-203ENST00000423487 CCDC85CA6NKD9 419 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 FAM189A1O60320 539 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 SERPINC1P01008 464 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 TIMP1P01033 207 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 RAG1P15918 1043 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 RFC2P35250 354 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 ACOT2P49753 483 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 POU5F1Q01860 360 aaKnown RBP17.37■□□□□ 0.37
ABCA1-203ENST00000423487 USP37Q86T82 979 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 ZSWIM2Q8NEG5 633 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 SEPT8Q92599 483 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 APBB2Q92870 758 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 SCLYQ96I15 445 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 FTHL17Q9BXU8 183 aa17.37■□□□□ 0.37
ABCA1-203ENST00000423487 CPSF3Q9UKF6 684 aaKnown RBP17.37■□□□□ 0.37
ABCA1-203ENST00000423487 TRIM43BA6NCK2 446 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 LRRC10BA6NIK2 292 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 CLTAP09496 248 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 FANCCQ00597 558 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 PPP2R3AQ06190 1150 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 DSC3Q14574 896 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 GPNMBQ14956 572 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 KRT31Q15323 416 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 PLEKHG4Q58EX7 1191 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 UBXN11Q5T124 520 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 CRELD2Q6UXH1 353 aaPredicted RBP17.36■□□□□ 0.37
ABCA1-203ENST00000423487 TRIM59Q8IWR1 403 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 TNS4Q8IZW8 715 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 TRIM43Q96BQ3 446 aaPredicted RBP17.36■□□□□ 0.37
ABCA1-203ENST00000423487 BORCS6Q96GS4 357 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 MFSD14AQ96MC6 490 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 TUBGCP2Q9BSJ2 902 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 CCDC94Q9BW85 323 aaPredicted RBP17.36■□□□□ 0.37
ABCA1-203ENST00000423487 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
ABCA1-203ENST00000423487 EIF2AQ9BY44 585 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms