RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 PXMP2Q9NR77 195 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 TMOD4Q9NZQ9 345 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 GTF3C4Q9UKN8 822 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 PNMA2Q9UL42 364 aa9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
TRIM49D1-201ENST00000420869 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.91
TRIM49D1-201ENST00000420869 C5orf60A6NFR6 353 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ANKRD63C9JTQ0 380 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SLC16A4O15374 487 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 STBD1O95210 358 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 GTF2H1P32780 548 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PEX3P56589 373 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RPS6P62753 249 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF211Q13398 564 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RASA3Q14644 834 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SNRNP35Q16560 246 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SLC39A4Q6P5W5 647 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 C6orf89Q6UWU4 347 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PARD3BQ8TEW8 1205 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 DDX1Q92499 740 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 KCNN1Q92952 543 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SLCO2A1Q92959 643 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 FAM129AQ9BZQ8 928 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 C17orf75Q9HAS0 396 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SEPT11Q9NVA2 429 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CTTNBP2NLQ9P2B4 639 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 UVRAGQ9P2Y5 699 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RASAL2Q9UJF2 1139 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TBX20Q9UMR3 447 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 EXOC7Q9UPT5 735 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SAMM50Q9Y512 469 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TMEM150BA6NC51 233 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ANKRD65E5RJM6 399 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 WNT10BO00744 389 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ATP9AO75110 1047 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 FDX1P10109 184 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 EIF2AK2P19525 551 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 COMTP21964 271 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 KCNA3P22001 575 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 MFAP3P55082 362 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RTP1P59025 263 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CDR2Q01850 454 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TTC31Q49AM3 519 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 SEL1L2Q5TEA6 688 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 KRT39Q6A163 491 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF746Q6NUN9 644 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 AADACL2Q6P093 401 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TTC27Q6P3X3 843 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 C15orf39Q6ZRI6 1047 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ANO5Q75V66 913 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 MAEAQ7L5Y9 396 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF564Q8TBZ8 553 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PSPC1Q8WXF1 523 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CENPTQ96BT3 561 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RUNDC3BQ96NL0 473 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 NTPCRQ9BSD7 190 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TMEM109Q9BVC6 243 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PABPC3Q9H361 631 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 LRRC4CQ9HCJ2 640 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 RAVER2Q9HCJ3 691 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PDLIM7Q9NR12 457 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 CNOT8Q9UFF9 292 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 BCS1LQ9Y276 419 aa9.39□□□□□ -0.91
TRIM49D1-201ENST00000420869 PLXNB2O15031 1838 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 PODXLO00592 558 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZC3H11AO75152 810 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 FSBPO95073 299 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 MMEP08473 750 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 CYP11B1P15538 503 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 COPB2P35606 906 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 RPL21P46778 160 aaKnown RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 NPTX2P47972 431 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 FNTAP49354 379 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 CYP24A1Q07973 514 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 PRPF4BQ13523 1007 aaKnown RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 XKR9Q5GH70 373 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 PLA2G4FQ68DD2 849 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 ZNF772Q68DY9 489 aaPredicted RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 SLC47A2Q86VL8 602 aa9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 SLC13A5Q86YT5 568 aaPredicted RBP9.38□□□□□ -0.91
TRIM49D1-201ENST00000420869 REPS2Q8NFH8 660 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms