RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ANKFY1Q9P2R3 1169 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 AGO2Q9UKV8 859 aaKnown RBP13.64□□□□□ -0.23
TMEM53-206ENST00000420706 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 GOLGA8IPA6NC78 632 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 GOLGA8JA6NMD2 632 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 EXTL3O43909 919 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 MGEA5O60502 916 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 EXOC3O60645 756 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 MCF2P10911 925 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 RFC2P35250 354 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 CASP4P49662 377 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.233e-11■□□□□ 9.8
TMEM53-206ENST00000420706 ZNF568Q3ZCX4 644 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 PLEKHG4Q58EX7 1191 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 MFSD5Q6N075 450 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 SLC27A1Q6PCB7 646 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 RTN4RL1Q86UN2 441 aaPredicted RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 DBF4BQ8NFT6 615 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 VWCEQ96DN2 955 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 ADPGKQ9BRR6 497 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 IFIH1Q9BYX4 1025 aaKnown RBP13.63□□□□□ -0.23
TMEM53-206ENST00000420706 THAP9Q9H5L6 903 aa13.63□□□□□ -0.23
TMEM53-206ENST00000420706 TANC1Q9C0D5 1861 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 OGTO15294 1046 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 FAM189A1O60320 539 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 AKAP3O75969 853 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 NPTXRO95502 500 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
TMEM53-206ENST00000420706 ZNF18P17022 549 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
TMEM53-206ENST00000420706 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 CDKAL1Q5VV42 579 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 CEP135Q66GS9 1140 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 TWF2Q6IBS0 349 aaKnown RBP13.62□□□□□ -0.23
TMEM53-206ENST00000420706 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
TMEM53-206ENST00000420706 DEFB128Q7Z7B8 93 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 THNSL1Q8IYQ7 743 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 SEPT8Q92599 483 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 APBB2Q92870 758 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 MKNK1Q9BUB5 465 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 KIAA1586Q9HCI6 787 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
TMEM53-206ENST00000420706 MAPK13O15264 365 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 SLC16A3O15427 465 aaKnown RBP13.61□□□□□ -0.23
TMEM53-206ENST00000420706 EVI5O60447 810 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 GNA14O95837 355 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 TNFSF9P41273 254 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 ACOT2P49753 483 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 TCTN1Q2MV58 587 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 HSP90AA4PQ58FG1 418 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 ZBTB41Q5SVQ8 909 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 CBWD2Q8IUF1 395 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 CEP120Q8N960 986 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
TMEM53-206ENST00000420706 DPF3Q92784 378 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 ADAM2Q99965 735 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 FTHL17Q9BXU8 183 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 RGS18Q9NS28 235 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 CPSF3Q9UKF6 684 aaKnown RBP13.61□□□□□ -0.23
TMEM53-206ENST00000420706 FRMD4BQ9Y2L6 1034 aa13.61□□□□□ -0.23
TMEM53-206ENST00000420706 TET1Q8NFU7 2136 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 ENPP3O14638 875 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 ZNF623O75123 536 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 ADRB2P07550 413 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 CSF2RAP15509 400 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 GRM5P41594 1212 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 MCCD1P59942 119 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 TPM4P67936 248 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 SNRNP35Q16560 246 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 KYAT1Q16773 422 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 FRMD5Q7Z6J6 570 aa13.6□□□□□ -0.23
TMEM53-206ENST00000420706 MRPL10Q7Z7H8 261 aaKnown RBP13.6□□□□□ -0.23
TMEM53-206ENST00000420706 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms