RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PASKQ96RG2 1323 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 RTN2O75298 545 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 RPSAP08865 295 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 XRCC4Q13426 336 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 SLMAPQ14BN4 828 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 P3H4Q92791 437 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 NSRP1Q9H0G5 558 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 STMN4Q9H169 189 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 ABCF3Q9NUQ8 709 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PCYOX1Q9UHG3 505 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 IPO5O00410 1097 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PLSCR1O15162 318 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 MXI1P50539 228 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PPP2R5CQ13362 524 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 AUHQ13825 339 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 ZKSCAN8Q15776 578 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 TRPM8Q7Z2W7 1104 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 PFASO15067 1338 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 ECEL1O95672 775 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 CREB1P16220 341 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 CTNNA2P26232 953 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 MMP14P50281 582 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 PEX5P50542 639 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF131P52739 623 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 TATDN1Q6P1N9 297 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 DAW1Q8N136 415 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 ACER1Q8TDN7 264 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 SLC5A5Q92911 643 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 RARGP13631 454 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 ELF3P78545 371 aaPredicted RBP16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 NFIL3Q16649 462 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 ARHGEF2Q92974 986 aaKnown RBP16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 FGFR1OP2Q9NVK5 253 aa16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEMA3B-203ENST00000419007 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 ASAP2O43150 1006 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 CALCAP01258 141 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 ATG4AQ8WYN0 398 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 WNT8AQ9H1J5 351 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 TBK1Q9UHD2 729 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 CNOT7Q9UIV1 285 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 TMEM150BA6NC51 233 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 DNAJC8O75937 253 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 GHRP10912 638 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 EXOC3L1Q86VI1 746 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 PDGFDQ9GZP0 370 aaPredicted RBP16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 HOMER3Q9NSC5 361 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 HSPBP1Q9NZL4 362 aa16.27■□□□□ 0.2
SEMA3B-203ENST00000419007 UBE4BO95155 1302 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 RFX1P22670 979 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 GBP1P32455 592 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 KRT17Q04695 432 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 CNGA2Q16280 664 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 PIGWQ7Z7B1 504 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 XXYLT1Q8NBI6 393 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 NOD2Q9HC29 1040 aa16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.19
SEMA3B-203ENST00000419007 TMEM120BA0PK00 339 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 RWDD2BP57060 319 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 RASA3Q14644 834 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 SAAL1Q96ER3 474 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 ATP6V1G2O95670 118 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 CHRNB2P17787 502 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 CROCCP2Q86T23 111 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 RUNDC3BQ96NL0 473 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 FAM118BQ9BPY3 351 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 TMEM117Q9H0C3 514 aa16.26■□□□□ 0.19
SEMA3B-203ENST00000419007 SLC16A4O15374 487 aa16.25■□□□□ 0.19
SEMA3B-203ENST00000419007 UBOX5O94941 541 aa16.25■□□□□ 0.19
SEMA3B-203ENST00000419007 KRT5P13647 590 aa16.25■□□□□ 0.19
SEMA3B-203ENST00000419007 ELF1P32519 619 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms