RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KRT36O76013 467 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 LYNP07948 512 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 ABCB4P21439 1286 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 NR2F2P24468 414 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 NAPAP54920 295 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 SH3BGRP55822 239 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 DNAJC3Q13217 504 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 MTA1Q13330 715 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 ACSBG2Q5FVE4 666 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 KRT79Q5XKE5 535 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 STX18Q9P2W9 335 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 FAM47DPA6NHR8 397 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 COILP38432 576 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 TAF1BQ53T94 588 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 SEPT14Q6ZU15 432 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 CCDC105Q8IYK2 499 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 STKLD1Q8NE28 680 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 SH3RF3Q8TEJ3 882 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF526Q8TF50 670 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 ARHGEF26Q96DR7 871 aa8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 CADM1Q9BY67 442 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-202ENST00000418170 MAP3K7O43318 606 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CDH16O75309 829 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 PSMG1O95456 288 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ASMTLO95671 621 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 GNA11P29992 359 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 LIN52Q52LA3 116 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SLC45A4Q5BKX6 768 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 TMEM63BQ5T3F8 832 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 RHBDF2Q6PJF5 856 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 EPM2AIP1Q7L775 607 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 UBL4BQ8N7F7 174 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SUDS3Q9H7L9 328 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 C6orf50Q9HD87 102 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 WHRNQ9P202 907 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF212Q9UDV6 495 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 COG5Q9UP83 839 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 PTPN22Q9Y2R2 807 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 EDF1O60869 148 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 MUTP22033 750 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 STAT1P42224 750 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 HADHBP55084 474 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 TNIP1Q15025 636 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 WDR72Q3MJ13 1102 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 MIGA2Q7L4E1 593 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CCDC65Q8IXS2 484 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ANKRD35Q8N283 1001 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 KRT35Q92764 455 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SLCO1B3Q9NPD5 702 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 IL17RBQ9NRM6 502 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 KRT82Q9NSB4 513 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 NAALADL1Q9UQQ1 740 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 TBC1D30Q9Y2I9 924 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ALG6Q9Y672 507 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 UBTFL6P0CB48 400 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CETPP11597 493 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 C11orf63Q6NUN7 778 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF365Q70YC5 407 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 KBTBD2Q8IY47 623 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CENPKQ9BS16 269 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SYT11Q9BT88 431 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 SYNCQ9H7C4 482 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 BMP2KQ9NSY1 1161 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ZFP69BQ9UJL9 534 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF510Q9Y2H8 683 aa8.57□□□□□ -1.04
HMGXB4-202ENST00000418170 CCDC22O60826 627 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 MARCKSL1P49006 195 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CDK7P50613 346 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ADCY1Q08828 1119 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ECM1Q16610 540 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 GJB7Q6PEY0 223 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CLNKQ7Z7G1 428 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ZSWIM1Q9BR11 485 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 THAP2Q9H0W7 228 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DCP1AQ9NPI6 582 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 EURLQ9NYK6 297 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 TBK1Q9UHD2 729 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 C2CD2LO14523 706 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SLC37A4O43826 429 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CHKAP35790 457 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 RTP1P59025 263 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 KYNUQ16719 465 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SEL1L2Q5TEA6 688 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 HS2ST1Q7LGA3 356 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms