RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 LOXHD1Q8IVV2 1947 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 ZNF536O15090 1300 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 MTA2O94776 668 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CAP2P40123 477 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 KCNJ1P48048 391 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 FMO1Q01740 532 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 SPP2Q13103 211 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 ZNF564Q8TBZ8 553 aaPredicted RBP16.1■□□□□ 0.17
TTC39A-208ENST00000413473 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 PGM2Q96G03 612 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 PTPN22Q9Y2R2 807 aa16.1■□□□□ 0.17
TTC39A-208ENST00000413473 GOLGA6L7A0A1B0GV03 622 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 CTNND1O60716 968 aaKnown RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 GGPS1O95749 300 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 ICAM1P05362 532 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 DRD4P21917 467 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 PTGER2P43116 358 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 MNAT1P51948 309 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 IFI35P80217 286 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 LLGL1Q15334 1064 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 GKAP1Q5VSY0 366 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 SLC13A5Q86YT5 568 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 FLAD1Q8NFF5 587 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 SAAL1Q96ER3 474 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 POP1Q99575 1024 aaKnown RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 MTRF1LQ9UGC7 380 aaKnown RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 RGS16O15492 202 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 RARAP10276 462 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 CHN1P15882 459 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 COILP38432 576 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-208ENST00000413473 CPXCR1Q8N123 301 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 MORC4Q8TE76 937 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 SHC3Q92529 594 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 ZNF653Q96CK0 615 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 SELENOSQ9BQE4 189 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 MTUS1Q9ULD2 1270 aa16.09■□□□□ 0.17
TTC39A-208ENST00000413473 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 MAPK13O15264 365 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 RAD17O75943 681 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ADSSP30520 456 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 MFAP3P55082 362 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 DRP2Q13474 957 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 SNRNP35Q16560 246 aaKnown RBP16.08■□□□□ 0.16
TTC39A-208ENST00000413473 UGCGQ16739 394 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 NSMFQ6X4W1 530 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CENPTQ96BT3 561 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CHMP6Q96FZ7 201 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 PARP2Q9UGN5 583 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.16
TTC39A-208ENST00000413473 PMM2O15305 246 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CYP1A2P05177 515 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ALAS1P13196 640 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CYP11B1P15538 503 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 FGFR4P22455 802 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 GBP1P32455 592 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 MMP13P45452 471 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 MTMR1Q13613 665 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 FAM102BQ5T8I3 360 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 RSBN1LQ6PCB5 846 aaPredicted RBP16.08■□□□□ 0.16
TTC39A-208ENST00000413473 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 FAM129AQ9BZQ8 928 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ADAM7Q9H2U9 754 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
TTC39A-208ENST00000413473 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-208ENST00000413473 DNM1LO00429 736 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 APBA3O96018 575 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 SLCO1A2P46721 670 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 SIX1Q15475 284 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-208ENST00000413473 CYP1B1Q16678 543 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 KRT39Q6A163 491 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 HOMER2Q9NSB8 354 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 GTF3C4Q9UKN8 822 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-208ENST00000413473 LYPLA2O95372 231 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 SMTNP53814 917 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-208ENST00000413473 XKR9Q5GH70 373 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 PLA2G4FQ68DD2 849 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 HELQQ8TDG4 1101 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 EPS8L3Q8TE67 593 aaKnown RBP16.07■□□□□ 0.16
TTC39A-208ENST00000413473 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
TTC39A-208ENST00000413473 BRWD3Q6RI45 1802 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms