RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 RAP1GAPP47736 663 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 FMO5P49326 533 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 CCDC150Q8NCX0 1101 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 OR8K1Q8NGG5 319 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 EIF2AQ9BY44 585 aaKnown RBP10.55□□□□□ -0.72
SMPD4-203ENST00000412570 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 DNAJC12Q9UKB3 198 aa10.55□□□□□ -0.72
SMPD4-203ENST00000412570 TRIP12Q14669 1992 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-203ENST00000412570 ZNF233A6NK53 670 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 TMEM110-MUSTN1A8MSY1 372 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 WEE2P0C1S8 567 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 MARCH8Q5T0T0 291 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GBP6Q6ZN66 633 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 SEMA4DQ92854 862 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 SEL1LQ9UBV2 794 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 UMODL1Q5DID0 1318 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 LCTP09848 1927 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 LYPLA2O95372 231 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 ARF4P18085 180 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 PON1P27169 355 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GRK4P32298 578 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 CPT1AP50416 773 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 MRPS25P82663 173 aaKnown RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GTF2BQ00403 316 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 KLHL30Q0D2K2 578 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 PTPN14Q15678 1187 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GPD1LQ8N335 351 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 MMS19Q96T76 1030 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 SNTG2Q9NY99 539 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 GNEQ9Y223 722 aaKnown RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 TRAF3IP3Q9Y228 551 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 C17orf102A2RUQ5 167 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 FKTNO75072 461 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 IPO7O95373 1038 aaKnown RBP10.54□□□□□ -0.72
SMPD4-203ENST00000412570 ARL2P36404 184 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 PPP2R5AQ15172 486 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 IER5Q5VY09 327 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 ABRAQ8N0Z2 381 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
SMPD4-203ENST00000412570 NAMPTP43490 491 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 CDH8P55286 799 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TARBP2Q15633 366 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 IQCEQ6IPM2 695 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 SV2AQ7L0J3 742 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 CNGA4Q8IV77 575 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 MAP4K3Q8IVH8 894 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PACSIN1Q9BY11 444 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 INTS2Q9H0H0 1204 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NXF3Q9H4D5 531 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NHEJ1Q9H9Q4 299 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PPP2R2CQ9Y2T4 447 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 UPP2O95045 317 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TMEM191BP0C7N4 346 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 UCHL3P15374 230 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PHKA2P46019 1235 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 CCL23P55773 120 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PPP2R3AQ06190 1150 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 EDRF1Q3B7T1 1238 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PLPPR4Q7Z2D5 763 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 MRPL4Q9BYD3 311 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NIFKQ9BYG3 293 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 ADGRA2Q96PE1 1338 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 EIF3DO15371 548 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 URI1O94763 535 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 NOP2P46087 812 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TFDP1Q14186 410 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 SFMBT2Q5VUG0 894 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PHLDB3Q6NSJ2 640 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TRIM65Q6PJ69 517 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 DEFB128Q7Z7B8 93 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 U2AF1L4Q8WU68 220 aaKnown RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PPP1R13BQ96KQ4 1090 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-203ENST00000412570 KCND2Q9NZV8 630 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 ARHGAP28Q9P2N2 729 aa10.53□□□□□ -0.72
SMPD4-203ENST00000412570 FOXN3O00409 490 aaPredicted RBP10.52□□□□□ -0.72
SMPD4-203ENST00000412570 CYP26A1O43174 497 aa10.52□□□□□ -0.72
SMPD4-203ENST00000412570 IGFBP6P24592 240 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms