RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 PRMT1Q99873 361 aaKnown RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 VPS11Q9H270 941 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 MTMR4Q9NYA4 1195 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 ITIH2P19823 946 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 PMLP29590 882 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 NUDCD3Q8IVD9 361 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 PPP1R16BQ96T49 567 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 KCND2Q9NZV8 630 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 FDX1P10109 184 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 KRT27Q7Z3Y8 459 aa17.74■□□□□ 0.43
TSC2-204ENST00000401874 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 TOPORSQ9NS56 1045 aaPredicted RBP17.74■□□□□ 0.43
TSC2-204ENST00000401874 CYP26A1O43174 497 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 CHN1P15882 459 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 FMO5P49326 533 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 ARSEP51690 589 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 SLC12A1Q13621 1099 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 KCNV2Q8TDN2 545 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 ERGIC2Q96RQ1 377 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 XAB2Q9HCS7 855 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 ZNF189O75820 626 aaPredicted RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 SCP2P22307 547 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 FAM182BQ5T319 152 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 CATSPER4Q7RTX7 472 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 FAM161BQ96MY7 647 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 NDE1Q9NXR1 346 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 RBAKQ9NYW8 714 aaPredicted RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 PCSK1NQ9UHG2 260 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 PPRC1Q5VV67 1664 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 KIF22Q14807 665 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 CEP55Q53EZ4 464 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 HEATR6Q6AI08 1181 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 DSTYKQ6XUX3 929 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 CNPY4Q8N129 248 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 SMYD3Q9H7B4 428 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 USP32Q8NFA0 1604 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 TCP11X1B4DZS4 312 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 NVLO15381 856 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 KITP10721 976 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 IREB2P48200 963 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 RAD23BP54727 409 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 KIF19Q2TAC6 998 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 PRPF38AQ8NAV1 312 aaKnown RBP17.73■□□□□ 0.43
TSC2-204ENST00000401874 TRIM51Q9BSJ1 452 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 PPCSQ9HAB8 311 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 MMP10P09238 476 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 BCAR1P56945 870 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 ZBTB17Q13105 803 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 HIF1AQ16665 826 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 RCOR2Q8IZ40 523 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 SUN2Q9UH99 717 aa17.73■□□□□ 0.43
TSC2-204ENST00000401874 RGS9BPQ6ZS82 235 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 RYBPQ8N488 228 aaPredicted RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 REEP2Q9BRK0 252 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 HERC5Q9UII4 1024 aaKnown RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 AGO2Q9UKV8 859 aaKnown RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 ZFXP17010 805 aaPredicted RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 ISCUQ9H1K1 167 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 CCDC195A0A1B0GUA6 201 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 KCTD17Q8N5Z5 321 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 WWP1Q9H0M0 922 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 RAD51CO43502 376 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 CDH16O75309 829 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 PPARGP37231 505 aaPredicted RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 SF3B3Q15393 1217 aaKnown RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 RWDD4Q6NW29 188 aaKnown RBP17.72■□□□□ 0.43
TSC2-204ENST00000401874 ARHGAP18Q8N392 663 aa17.72■□□□□ 0.43
TSC2-204ENST00000401874 YWHAHQ04917 246 aaPredicted RBP17.71■□□□□ 0.43
TSC2-204ENST00000401874 USP38Q8NB14 1042 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 NOA1Q8NC60 698 aaKnown RBP17.71■□□□□ 0.43
TSC2-204ENST00000401874 BEST2Q8NFU1 509 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 FOXP3Q9BZS1 431 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 HSPBP1Q9NZL4 362 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 STAP1Q9ULZ2 295 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 CFAP69A5D8W1 941 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 PDHA1P08559 390 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 TMEM253P0C7T8 217 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 MCF2P10911 925 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 LSP1P33241 339 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
TSC2-204ENST00000401874 FGD4Q96M96 766 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 SENP2Q9HC62 589 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 USP15Q9Y4E8 981 aaPredicted RBP17.71■□□□□ 0.43
TSC2-204ENST00000401874 CIITAP33076 1130 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 INPP1P49441 399 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
TSC2-204ENST00000401874 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms