RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 FAM13CQ8NE31 585 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 EZH1Q92800 747 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-205ENST00000399903 FGD4Q96M96 766 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 TXLNGYQ9BZA5 131 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 KIAA1683Q9H0B3 1180 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 NT5C3AQ9H0P0 336 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 IKZF4Q9H2S9 585 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 GRHL1Q9NZI5 618 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 ANKRD33BA6NCL7 494 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 GNA14O95837 355 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
PTPRA-205ENST00000399903 ADCY7P51828 1080 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 HP1BP3Q5SSJ5 553 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-205ENST00000399903 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 LRRC37BQ96QE4 947 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 EPAS1Q99814 870 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 PEX11AO75192 247 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 TTC27Q6P3X3 843 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 SLCO1B3Q9NPD5 702 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 STXBP5LQ9Y2K9 1186 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 THAP12O43422 761 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 UBTFL6P0CB48 400 aaPredicted RBP18.27■□□□□ 0.52
PTPRA-205ENST00000399903 TPBGLP0DKB5 382 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 SP100P23497 879 aaPredicted RBP18.27■□□□□ 0.52
PTPRA-205ENST00000399903 ALDH3A1P30838 453 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 JAG1P78504 1218 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 PRUNE1Q86TP1 453 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 RDH13Q8NBN7 331 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 C1orf54Q8WWF1 131 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 CEP63Q96MT8 703 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 SCOCQ9UIL1 159 aa18.27■□□□□ 0.52
PTPRA-205ENST00000399903 SFI1A8K8P3 1242 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 ATMINO43313 823 aaPredicted RBP18.27■□□□□ 0.51
PTPRA-205ENST00000399903 EDIL3O43854 480 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 RAD17O75943 681 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 ATP6V1C1P21283 382 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 SERPINB4P48594 390 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 ZNF543Q08ER8 600 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 ZCWPW2Q504Y3 356 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 RASIP1Q5U651 963 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 VSTM1Q6UX27 236 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 LNX1Q8TBB1 728 aaPredicted RBP18.27■□□□□ 0.51
PTPRA-205ENST00000399903 LRRC8CQ8TDW0 803 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 DNAJC19Q96DA6 116 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 CYP39A1Q9NYL5 469 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 FAM198AQ9UFP1 575 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.51
PTPRA-205ENST00000399903 FAM187AA6NFU0 413 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 TCP10L2B9ZVM9 353 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 LIN7AO14910 233 aaPredicted RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PLA2G4BP0C869 781 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 ZCCHC18P0CG32 403 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 STAT3P40763 770 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 TMED2Q15363 201 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 CYP4F22Q6NT55 531 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PALB2Q86YC2 1186 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 TBC1D10AQ9BXI6 508 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 DDX3YO15523 660 aaKnown RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 LRRC23Q53EV4 343 aaPredicted RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 SEL1L2Q5TEA6 688 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 ASRGL1Q7L266 308 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PRELID2Q8N945 189 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 RFFLQ8WZ73 363 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 BTBD6Q96KE9 485 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 LRRC27Q9C0I9 530 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 ALG6Q9Y672 507 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 MAST2Q6P0Q8 1798 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 hCG_2014768A0A024R1R8 64 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 WDR91A4D1P6 747 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 NVLO15381 856 aaKnown RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.513e-13■■■■■ 32.1
PTPRA-205ENST00000399903 CUL3Q13618 768 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 DHX34Q14147 1143 aaKnown RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 PDCD2Q16342 344 aaPredicted RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
PTPRA-205ENST00000399903 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 CCNJLQ8IV13 435 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 SEC14L1Q92503 715 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 GBP5Q96PP8 586 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 FAM118BQ9BPY3 351 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 BCAS3Q9H6U6 928 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 USH1CQ9Y6N9 552 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 DLEC1Q9Y238 1755 aa18.26■□□□□ 0.51
PTPRA-205ENST00000399903 DLATP10515 647 aaKnown RBP18.25■□□□□ 0.51
PTPRA-205ENST00000399903 KCNA3P22001 575 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 CYP4X1Q8N118 509 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 PRMT6Q96LA8 375 aaPredicted RBP18.25■□□□□ 0.51
PTPRA-205ENST00000399903 RGL1Q9NZL6 768 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 SPOPO43791 374 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 PHF2O75151 1096 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 MIGA2Q7L4E1 593 aa18.25■□□□□ 0.51
PTPRA-205ENST00000399903 DAGLBQ8NCG7 672 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms