RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 PSMD6Q15008 389 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 SYCP1Q15431 976 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 AMHR2Q16671 573 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 FAM47CQ5HY64 1035 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 NOTUMQ6P988 496 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 PARD3BQ8TEW8 1205 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 ANKFY1Q9P2R3 1169 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 OGDHLQ9ULD0 1010 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 CAPN11Q9UMQ6 739 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 SIK3Q9Y2K2 1263 aa20.69■□□□□ 0.9
TSPAN4-204ENST00000397404 A0A1B0GUA9 196 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 GJB1P08034 283 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 MRPS6P82932 125 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 KIZQ2M2Z5 673 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 GDF6Q6KF10 455 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 RUFY4Q6ZNE9 571 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 LRRC8AQ8IWT6 810 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 USP38Q8NB14 1042 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 NEK11Q8NG66 645 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 PCMTD1Q96MG8 357 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 TSPAN18Q96SJ8 248 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 CELF4Q9BZC1 486 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 STARD7Q9NQZ5 370 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 MYO6Q9UM54 1294 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 NOD1Q9Y239 953 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 LUC7L2Q9Y383 392 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 TRPV2Q9Y5S1 764 aa20.68■□□□□ 0.9
TSPAN4-204ENST00000397404 MROH7Q68CQ1 1323 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 TISP43B9A030 160 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 IL18RAPO95256 599 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 ARID5BQ14865 1188 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 PTGISQ16647 500 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 CD302Q8IX05 232 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 FAM213AQ9BRX8 229 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 IKZF4Q9H2S9 585 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 MINDY3Q9H8M7 445 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 TMEM8AQ9HCN3 771 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 USP20Q9Y2K6 914 aa20.67■□□□□ 0.9
TSPAN4-204ENST00000397404 A0A1W2PQ45 241 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 A0A1W2PQY0 241 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 ABLIM1O14639 778 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 TSPAN1O60635 241 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 KCNJ6P48051 423 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 ZBED6P86452 979 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 SNX17Q15036 470 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 KRT39Q6A163 491 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 CATSPER4Q7RTX7 472 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 NT5DC4Q86YG4 428 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 CBWD2Q8IUF1 395 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 BRSK2Q8IWQ3 736 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 CCDC155Q8N6L0 562 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 RDH13Q8NBN7 331 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 SAAL1Q96ER3 474 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 CHST12Q9NRB3 414 aa20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 RBAKQ9NYW8 714 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-204ENST00000397404 MFAP3LO75121 409 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 MYCNP04198 464 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 GYPCP04921 128 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 CLTAP09496 248 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 HSPA8P11142 646 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 CCL5P13501 91 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 MXI1P50539 228 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 HIC1Q14526 733 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 SLC27A1Q6PCB7 646 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 ARMC5Q96C12 935 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 ZBTB10Q96DT7 871 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 TTYH3Q9C0H2 523 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 RNF208Q9H0X6 261 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 CEP72Q9P209 647 aa20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 CPSF3Q9UKF6 684 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-204ENST00000397404 ARVCFO00192 962 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 FAM189A1O60320 539 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 ARF4P18085 180 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 MYL7Q01449 175 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 RBL2Q08999 1139 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 FAM26DQ5JW98 314 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 ANKLE1Q8NAG6 615 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 OR8K1Q8NGG5 319 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 CAGE1Q8TC20 777 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 SYN2Q92777 582 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 OSMRQ99650 979 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 PDZD7Q9H5P4 517 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 MMRN2Q9H8L6 949 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 AGPAT5Q9NUQ2 364 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 ZNHIT6Q9NWK9 470 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 GCNT4Q9P109 453 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 COQ4Q9Y3A0 265 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 GRIN2DO15399 1336 aa20.64■□□□□ 0.89
TSPAN4-204ENST00000397404 GPR182O15218 404 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 ADRB2P07550 413 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 IQCF3P0C7M6 154 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 CRELD2Q6UXH1 353 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 WDR49Q8IV35 697 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 TC2NQ8N9U0 490 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms