RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 RABGAP1Q9Y3P9 1069 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 FOXN3O00409 490 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 OAS1P00973 400 aaKnown RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ALADP13716 330 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 COMTP21964 271 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 COILP38432 576 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 RFC5P40937 340 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 MSH2P43246 934 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SESN3P58005 492 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 MYL7Q01449 175 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SPIRE1Q08AE8 756 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 COG2Q14746 738 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 GALNTL6Q49A17 601 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ANO7Q6IWH7 933 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 MFSD5Q6N075 450 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ZNF746Q6NUN9 644 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 HS2ST1Q7LGA3 356 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 DRAXINQ8NBI3 349 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SLC20A1Q8WUM9 679 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SYT11Q9BT88 431 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ROPN1BQ9BZX4 212 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 GLT8D2Q9H1C3 349 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 CDC42EP4Q9H3Q1 356 aaKnown RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ROPN1Q9HAT0 212 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 FRMD4BQ9Y2L6 1034 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 DOT1LQ8TEK3 1739 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 PFASO15067 1338 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 NAV1Q8NEY1 1877 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 TCRBV7S2A1N4TA0A589 114 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 LRRD1A4D1F6 860 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 SPOPO43791 374 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CTNNA2P26232 953 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ATP5DP30049 168 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ADCY1Q08828 1119 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PDCD2Q16342 344 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ETNPPLQ8TBG4 499 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PIGOQ8TEQ8 1089 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ART4Q93070 314 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TRIM7Q9C029 511 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GPR88Q9GZN0 384 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TMEM165Q9HC07 324 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 RGL1Q9NZL6 768 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CYP3A7-CYP3A51PA0A087WV96 503 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 UFL1O94874 794 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ECEL1O95672 775 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GGPS1O95749 300 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PYGMP11217 842 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CYP3A7P24462 503 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 STX2P32856 288 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CTTNQ14247 550 aaKnown RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TNFAIP8L3Q5GJ75 292 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 C11orf63Q6NUN7 778 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TRMT10CQ7L0Y3 403 aaKnown RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 FITM2Q8N6M3 262 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PPP1R12CQ9BZL4 782 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TRIM4Q9C037 500 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 KLHL14Q9P2G3 628 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CTNNAL1Q9UBT7 734 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 BCS1LQ9Y276 419 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 RNF8O76064 485 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GAP43P17677 238 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GPC5P78333 572 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GRAPQ13588 217 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 CYFIP1Q7L576 1253 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 SLC13A5Q86YT5 568 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PHC3Q8NDX5 983 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 GRAPLQ8TC17 118 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 TGS1Q96RS0 853 aaKnown RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 POP1Q99575 1024 aaKnown RBP9.82□□□□□ -0.84
CAPN3-206ENST00000397163 RXFP1Q9HBX9 757 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ARHGEF3Q9NR81 526 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 DLGAP2Q9P1A6 1054 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 ASIC3Q9UHC3 531 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 PCDHA3Q9Y5H8 950 aa9.82□□□□□ -0.84
CAPN3-206ENST00000397163 IGKV6D-41A0A0C4DH26 115 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 O00370 1275 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 EYA4O95677 639 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 BCRP11274 1271 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 BRAFP15056 766 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 POLD1P28340 1107 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 RAD23BP54727 409 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 ROR2Q01974 943 aaKnown RBP9.81□□□□□ -0.84
CAPN3-206ENST00000397163 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 VSTM1Q6UX27 236 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 MFN1Q8IWA4 741 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 SERPINB12Q96P63 405 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 OCEL1Q9H607 264 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-206ENST00000397163 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 DDX60LQ5H9U9 1706 aaKnown RBP9.81□□□□□ -0.84
CAPN3-206ENST00000397163 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms