RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ABCB11O95342 1321 aa8.25□□□□□ -1.09
TRBV28-201ENST00000390400 B2RBV5 119 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 STXBP3O00186 592 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ATP2A1O14983 1001 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 CA12O43570 354 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ZEB2O60315 1214 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 DNAJA2O60884 412 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 CNMDO75829 334 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ALAS1P13196 640 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 LMAN1P49257 510 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ADCY7P51828 1080 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 NAPAP54920 295 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 CCNA1P78396 465 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 RPL6Q02878 288 aaKnown RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 CRHR2Q13324 411 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 PLCB4Q15147 1175 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 LONRF2Q1L5Z9 754 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 TKFCQ3LXA3 575 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 WDR93Q6P2C0 686 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 SRGAP1Q7Z6B7 1085 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 RBBP8NLQ8NC74 664 aaPredicted RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 COA7Q96BR5 231 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 WDR89Q96FK6 387 aaPredicted RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 SPATC1LQ9H0A9 340 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 TXNRD2Q9NNW7 524 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 VPS54Q9P1Q0 977 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 BTBD7Q9P203 1132 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 RBPJLQ9UBG7 517 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ZNF214Q9UL59 606 aaPredicted RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 MRPL11Q9Y3B7 192 aaKnown RBP8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ZNF536O15090 1300 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
TRBV28-201ENST00000390400 RBBP6Q7Z6E9 1792 aaKnown RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ESYT2A0FGR8 921 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ELOA3DA6NLF2 546 aaPredicted RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 USP27XA6NNY8 438 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 H3BQV1 296 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 H3BRJ5 948 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 LINC01387J3KSC0 135 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ZNF862O60290 1169 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 TLR2O60603 784 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 PEX10O60683 326 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 SHOX2O60902 331 aaPredicted RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 SLC25A27O95847 323 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ALBP02768 609 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 TAL1P17542 331 aaPredicted RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 CALML3P27482 149 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ADH6P28332 368 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 NLRP12P59046 1061 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 NLRP5P59047 1200 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ERVK-24P63145 666 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 DRP2Q13474 957 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 LRRC14Q15048 493 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 SAFBQ15424 915 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 DDR2Q16832 855 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 FAM110CQ1W6H9 321 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ELOA3BQ3SY89 546 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 YTHDF3Q7Z739 585 aaKnown RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 RIOX2Q8IUF8 465 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC50Q8IVM0 306 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 ELOA3Q8NG57 546 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 MRPS27Q92552 414 aaKnown RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 SECISBP2LQ93073 1101 aaKnown RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 DNAJC7Q99615 494 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC86Q9H6F5 360 aaKnown RBP8.23□□□□□ -1.09
TRBV28-201ENST00000390400 RNF146Q9NTX7 359 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 MORF4L1Q9UBU8 362 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 FBXO40Q9UH90 709 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 CPA4Q9UI42 421 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 SAMM50Q9Y512 469 aa8.23□□□□□ -1.09
TRBV28-201ENST00000390400 DOCK3Q8IZD9 2030 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 FAM237AA0A1B0GTK4 181 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 TARSL2A2RTX5 802 aaKnown RBP8.22□□□□□ -1.09
TRBV28-201ENST00000390400 ATE1O95260 518 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 BCRP11274 1271 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 GNA11P29992 359 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 MRPL12P52815 198 aaKnown RBP8.22□□□□□ -1.09
TRBV28-201ENST00000390400 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 MAP2K1Q02750 393 aaPredicted RBP8.22□□□□□ -1.09
TRBV28-201ENST00000390400 GSTM4Q03013 218 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 BEND6Q5SZJ8 279 aaPredicted RBP8.22□□□□□ -1.09
TRBV28-201ENST00000390400 WDR78Q5VTH9 848 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 KRT40Q6A162 431 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 GALNT17Q6IS24 598 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 C17orf99Q6UX52 265 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 BRAPQ7Z569 592 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 SHCBP1Q8NEM2 672 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 CHST13Q8NET6 341 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 MAGEC3Q8TD91 643 aa8.22□□□□□ -1.09
TRBV28-201ENST00000390400 SLC7A3Q8WY07 619 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms