RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IRF5Q13568 498 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 C16orf72Q14CZ0 275 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 TTF1Q15361 905 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 NDUFA5Q16718 116 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RABL6Q3YEC7 729 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 EPHA10Q5JZY3 1008 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 COPS6Q7L5N1 327 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ACMSDQ8TDX5 336 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 XAGE3Q8WTP9 111 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 LPIN2Q92539 896 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 STAMQ92783 540 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ERLEC1Q96DZ1 483 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 PRKAG3Q9UGI9 489 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RPL26L1Q9UNX3 145 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 UMODL1Q5DID0 1318 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RGS16O15492 202 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 SNRPA1P09661 255 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 TFPTP0C1Z6 253 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ACADSBP45954 432 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 COPB1P53618 953 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RASA2Q15283 850 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 HSP90AA5PQ58FG0 334 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 TWF2Q6IBS0 349 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RFWD3Q6PCD5 774 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 OSCP1Q8WVF1 389 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 NHEJ1Q9H9Q4 299 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 UTP11Q9Y3A2 253 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF609O15014 1411 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ATP5J2-PTCD1G3V325 749 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 OCM2P0CE71 109 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 KAZALD1Q96I82 304 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 C8orf48Q96LL4 319 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 NEURL2Q9BR09 285 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 KIAA1683Q9H0B3 1180 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 EPB41L1Q9H4G0 881 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 EHD1Q9H4M9 534 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 PALMDQ9NP74 551 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 FOXD2O60548 495 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 PSMG1O95456 288 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 DDX58O95786 925 aaKnown RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 GLULP15104 373 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 GNA11P29992 359 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ECHS1P30084 290 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 EIF3BP55884 814 aaKnown RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 COL19A1Q14993 1142 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ECHDC2Q86YB7 292 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ANKLE1Q8NAG6 615 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 OR7G1Q8NGA0 311 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF274Q96GC6 653 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 KLHL4Q9C0H6 718 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 NEUROG2Q9H2A3 272 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 MAGEC2Q9UBF1 373 aaPredicted RBP9.96□□□□□ -0.81
PTPRA-204ENST00000380393 SLC30A1Q9Y6M5 507 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF536O15090 1300 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 TMEM114B3SHH9 223 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 SEMA3EO15041 775 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 STRNO43815 780 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 TRPA1O75762 1119 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 CHKAP35790 457 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 GSSP48637 474 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 MAP3K10Q02779 954 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 MGAT5Q09328 741 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 PPP2R5CQ13362 524 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 IL23RQ5VWK5 629 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 PDXDC1Q6P996 788 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 DSTYKQ6XUX3 929 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 KRT26Q7Z3Y9 468 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 DNAJC7Q99615 494 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 AZI2Q9H6S1 392 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 PLGRKTQ9HBL7 147 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF212Q9UDV6 495 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 LZTS1Q9Y250 596 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 IKBKGQ9Y6K9 419 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 NUMBLQ9Y6R0 609 aa9.96□□□□□ -0.81
PTPRA-204ENST00000380393 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 ADCY6O43306 1168 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 ZNF862O60290 1169 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 STAMBPO95630 424 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 KRT75O95678 551 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 CCDC159P0C7I6 412 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 PCSK6P29122 969 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 ETV3P41162 512 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 PRKCIP41743 596 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 AP3M2P53677 418 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms